Gene : Thecc1EG022097 T. cacao v1.1
Defline:  (1 of 2) PTHR32295//PTHR32295:SF32 - FAMILY NOT NAMED // PROTEIN IQ-DOMAIN 3-RELATED Genomic Order:  526
Name:  ? Thecc1EG022097 Secondary Identifier:  ? PAC:27421117
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022097 0.5kb upstream 0.5kb upstream 4719 true scaffold_5: 2612705-2617423 Theobroma cacao
Thecc1EG022097 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2616924-2617423 Theobroma cacao
Thecc1EG022097 0.5kb downstream 0.5kb downstream 4719 true scaffold_5: 2612205-2616923 Theobroma cacao
Thecc1EG022097 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2612205-2612704 Theobroma cacao
Thecc1EG022097 1.0kb upstream 1.0kb upstream 5219 true scaffold_5: 2612705-2617923 Theobroma cacao
Thecc1EG022097 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2616924-2617923 Theobroma cacao
Thecc1EG022097 1.0kb downstream 1.0kb downstream 5219 true scaffold_5: 2611705-2616923 Theobroma cacao
Thecc1EG022097 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2611705-2612704 Theobroma cacao
Thecc1EG022097 2.0kb upstream 2.0kb upstream 6219 true scaffold_5: 2612705-2618923 Theobroma cacao
Thecc1EG022097 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2616924-2618923 Theobroma cacao
Thecc1EG022097 2.0kb downstream 2.0kb downstream 6219 true scaffold_5: 2610705-2616923 Theobroma cacao
Thecc1EG022097 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2610705-2612704 Theobroma cacao
Thecc1EG022097 5.0kb upstream 5.0kb upstream 9219 true scaffold_5: 2612705-2621923 Theobroma cacao
Thecc1EG022097 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2616924-2621923 Theobroma cacao
Thecc1EG022097 5.0kb downstream 5.0kb downstream 9219 true scaffold_5: 2607705-2616923 Theobroma cacao
Thecc1EG022097 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2607705-2612704 Theobroma cacao
Thecc1EG022097 10.0kb upstream 10.0kb upstream 14219 true scaffold_5: 2612705-2626923 Theobroma cacao
Thecc1EG022097 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2616924-2626923 Theobroma cacao
Thecc1EG022097 10.0kb downstream 10.0kb downstream 14219 true scaffold_5: 2602705-2616923 Theobroma cacao
Thecc1EG022097 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2602705-2612704 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835244 5264 Brassicales-Malvales View MSA
124346294 5266 SBM View MSA
124253860 5268 Malvidae View MSA
124069288 5270 Rosid View MSA
123743495 5271 Pentapetalae View MSA
122791469 5272 Eudicot View MSA
122044352 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain