Gene : Thecc1EG022070 T. cacao v1.1
Defline:  (1 of 1) PTHR10848:SF0 - MEIOTIC RECOMBINATION PROTEIN SPO11 Genomic Order:  501
Name:  ? Thecc1EG022070 Secondary Identifier:  ? PAC:27421254
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022070 0.5kb upstream 0.5kb upstream 2768 true scaffold_5: 2472448-2475215 Theobroma cacao
Thecc1EG022070 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2472448-2472947 Theobroma cacao
Thecc1EG022070 0.5kb downstream 0.5kb downstream 2768 true scaffold_5: 2472948-2475715 Theobroma cacao
Thecc1EG022070 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2475216-2475715 Theobroma cacao
Thecc1EG022070 1.0kb upstream 1.0kb upstream 3268 true scaffold_5: 2471948-2475215 Theobroma cacao
Thecc1EG022070 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2471948-2472947 Theobroma cacao
Thecc1EG022070 1.0kb downstream 1.0kb downstream 3268 true scaffold_5: 2472948-2476215 Theobroma cacao
Thecc1EG022070 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2475216-2476215 Theobroma cacao
Thecc1EG022070 2.0kb upstream 2.0kb upstream 4268 true scaffold_5: 2470948-2475215 Theobroma cacao
Thecc1EG022070 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2470948-2472947 Theobroma cacao
Thecc1EG022070 2.0kb downstream 2.0kb downstream 4268 true scaffold_5: 2472948-2477215 Theobroma cacao
Thecc1EG022070 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2475216-2477215 Theobroma cacao
Thecc1EG022070 5.0kb upstream 5.0kb upstream 7268 true scaffold_5: 2467948-2475215 Theobroma cacao
Thecc1EG022070 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2467948-2472947 Theobroma cacao
Thecc1EG022070 5.0kb downstream 5.0kb downstream 7268 true scaffold_5: 2472948-2480215 Theobroma cacao
Thecc1EG022070 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2475216-2480215 Theobroma cacao
Thecc1EG022070 10.0kb upstream 10.0kb upstream 12268 true scaffold_5: 2462948-2475215 Theobroma cacao
Thecc1EG022070 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2462948-2472947 Theobroma cacao
Thecc1EG022070 10.0kb downstream 10.0kb downstream 12268 true scaffold_5: 2472948-2485215 Theobroma cacao
Thecc1EG022070 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2475216-2485215 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830310 5264 Brassicales-Malvales View MSA
124339015 5266 SBM View MSA
124241532 5268 Malvidae View MSA
124068832 5270 Rosid View MSA
123738269 5271 Pentapetalae View MSA
122790268 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain