Gene : Thecc1EG022058 T. cacao v1.1
Defline:  (1 of 1) PTHR30238:SF0 - PROTEIN PIGMENT DEFECTIVE 149 Genomic Order:  489
Name:  ? Thecc1EG022058 Secondary Identifier:  ? PAC:27422077
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022058 0.5kb upstream 0.5kb upstream 5830 true scaffold_5: 2413365-2419194 Theobroma cacao
Thecc1EG022058 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2413365-2413864 Theobroma cacao
Thecc1EG022058 0.5kb downstream 0.5kb downstream 5830 true scaffold_5: 2413865-2419694 Theobroma cacao
Thecc1EG022058 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2419195-2419694 Theobroma cacao
Thecc1EG022058 1.0kb upstream 1.0kb upstream 6330 true scaffold_5: 2412865-2419194 Theobroma cacao
Thecc1EG022058 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2412865-2413864 Theobroma cacao
Thecc1EG022058 1.0kb downstream 1.0kb downstream 6330 true scaffold_5: 2413865-2420194 Theobroma cacao
Thecc1EG022058 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2419195-2420194 Theobroma cacao
Thecc1EG022058 2.0kb upstream 2.0kb upstream 7330 true scaffold_5: 2411865-2419194 Theobroma cacao
Thecc1EG022058 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2411865-2413864 Theobroma cacao
Thecc1EG022058 2.0kb downstream 2.0kb downstream 7330 true scaffold_5: 2413865-2421194 Theobroma cacao
Thecc1EG022058 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2419195-2421194 Theobroma cacao
Thecc1EG022058 5.0kb upstream 5.0kb upstream 10330 true scaffold_5: 2408865-2419194 Theobroma cacao
Thecc1EG022058 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2408865-2413864 Theobroma cacao
Thecc1EG022058 5.0kb downstream 5.0kb downstream 10330 true scaffold_5: 2413865-2424194 Theobroma cacao
Thecc1EG022058 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2419195-2424194 Theobroma cacao
Thecc1EG022058 10.0kb upstream 10.0kb upstream 15330 true scaffold_5: 2403865-2419194 Theobroma cacao
Thecc1EG022058 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2403865-2413864 Theobroma cacao
Thecc1EG022058 10.0kb downstream 10.0kb downstream 15330 true scaffold_5: 2413865-2429194 Theobroma cacao
Thecc1EG022058 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2419195-2429194 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026321 5273 Angiosperm View MSA
123832955 5264 Brassicales-Malvales View MSA
124337641 5266 SBM View MSA
124250090 5268 Malvidae View MSA
124064171 5270 Rosid View MSA
123748654 5271 Pentapetalae View MSA
122791010 5272 Eudicot View MSA
121349426 5274 Embryophyte View MSA
123424964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain