Gene : Pavir.2KG506700 P. virgatum v4.1
Defline:  (1 of 1) PTHR21649:SF13 - LHCA2 PROTEIN Genomic Order:  4591
Name:  ? Pavir.2KG506700 Secondary Identifier:  ? PAC:37564400
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG506700 0.5kb upstream 0.5kb upstream 2414 true Chr02K: 84287550-84289963 Panicum virgatum
Pavir.2KG506700 0.5kb upstream 0.5kb upstream 500 false Chr02K: 84287550-84288049 Panicum virgatum
Pavir.2KG506700 0.5kb downstream 0.5kb downstream 2414 true Chr02K: 84288050-84290463 Panicum virgatum
Pavir.2KG506700 0.5kb downstream 0.5kb downstream 500 false Chr02K: 84289964-84290463 Panicum virgatum
Pavir.2KG506700 1.0kb upstream 1.0kb upstream 2914 true Chr02K: 84287050-84289963 Panicum virgatum
Pavir.2KG506700 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 84287050-84288049 Panicum virgatum
Pavir.2KG506700 1.0kb downstream 1.0kb downstream 2914 true Chr02K: 84288050-84290963 Panicum virgatum
Pavir.2KG506700 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 84289964-84290963 Panicum virgatum
Pavir.2KG506700 2.0kb upstream 2.0kb upstream 3914 true Chr02K: 84286050-84289963 Panicum virgatum
Pavir.2KG506700 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 84286050-84288049 Panicum virgatum
Pavir.2KG506700 2.0kb downstream 2.0kb downstream 3914 true Chr02K: 84288050-84291963 Panicum virgatum
Pavir.2KG506700 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 84289964-84291963 Panicum virgatum
Pavir.2KG506700 5.0kb upstream 5.0kb upstream 6914 true Chr02K: 84283050-84289963 Panicum virgatum
Pavir.2KG506700 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 84283050-84288049 Panicum virgatum
Pavir.2KG506700 5.0kb downstream 5.0kb downstream 6914 true Chr02K: 84288050-84294963 Panicum virgatum
Pavir.2KG506700 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 84289964-84294963 Panicum virgatum
Pavir.2KG506700 10.0kb upstream 10.0kb upstream 11914 true Chr02K: 84278050-84289963 Panicum virgatum
Pavir.2KG506700 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 84278050-84288049 Panicum virgatum
Pavir.2KG506700 10.0kb downstream 10.0kb downstream 11914 true Chr02K: 84288050-84299963 Panicum virgatum
Pavir.2KG506700 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 84289964-84299963 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122076557 5267 Panicoideae Singleton cluster - no MSA
124586394 5269 Grass View MSA
122046380 5273 Angiosperm View MSA
121344826 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain