Gene : Thecc1EG022008 T. cacao v1.1
Defline:  F-box family protein Genomic Order:  443
Name:  ? Thecc1EG022008 Secondary Identifier:  ? PAC:27424351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022008 0.5kb upstream 0.5kb upstream 4885 true scaffold_5: 2204809-2209693 Theobroma cacao
Thecc1EG022008 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2209194-2209693 Theobroma cacao
Thecc1EG022008 0.5kb downstream 0.5kb downstream 4885 true scaffold_5: 2204309-2209193 Theobroma cacao
Thecc1EG022008 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2204309-2204808 Theobroma cacao
Thecc1EG022008 1.0kb upstream 1.0kb upstream 5385 true scaffold_5: 2204809-2210193 Theobroma cacao
Thecc1EG022008 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2209194-2210193 Theobroma cacao
Thecc1EG022008 1.0kb downstream 1.0kb downstream 5385 true scaffold_5: 2203809-2209193 Theobroma cacao
Thecc1EG022008 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2203809-2204808 Theobroma cacao
Thecc1EG022008 2.0kb upstream 2.0kb upstream 6385 true scaffold_5: 2204809-2211193 Theobroma cacao
Thecc1EG022008 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2209194-2211193 Theobroma cacao
Thecc1EG022008 2.0kb downstream 2.0kb downstream 6385 true scaffold_5: 2202809-2209193 Theobroma cacao
Thecc1EG022008 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2202809-2204808 Theobroma cacao
Thecc1EG022008 5.0kb upstream 5.0kb upstream 9385 true scaffold_5: 2204809-2214193 Theobroma cacao
Thecc1EG022008 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2209194-2214193 Theobroma cacao
Thecc1EG022008 5.0kb downstream 5.0kb downstream 9385 true scaffold_5: 2199809-2209193 Theobroma cacao
Thecc1EG022008 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2199809-2204808 Theobroma cacao
Thecc1EG022008 10.0kb upstream 10.0kb upstream 14385 true scaffold_5: 2204809-2219193 Theobroma cacao
Thecc1EG022008 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2209194-2219193 Theobroma cacao
Thecc1EG022008 10.0kb downstream 10.0kb downstream 14385 true scaffold_5: 2194809-2209193 Theobroma cacao
Thecc1EG022008 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2194809-2204808 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823757 5264 Brassicales-Malvales View MSA
124319817 5266 SBM View MSA
124168329 5268 Malvidae View MSA
124074285 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain