Gene : Thecc1EG021989 T. cacao v1.1
Defline:  (1 of 1) PF06663 - Protein of unknown function (DUF1170) (DUF1170) Genomic Order:  427
Name:  ? Thecc1EG021989 Secondary Identifier:  ? PAC:27423753
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021989 0.5kb upstream 0.5kb upstream 2545 true scaffold_5: 2102657-2105201 Theobroma cacao
Thecc1EG021989 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2104702-2105201 Theobroma cacao
Thecc1EG021989 0.5kb downstream 0.5kb downstream 2545 true scaffold_5: 2102157-2104701 Theobroma cacao
Thecc1EG021989 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2102157-2102656 Theobroma cacao
Thecc1EG021989 1.0kb upstream 1.0kb upstream 3045 true scaffold_5: 2102657-2105701 Theobroma cacao
Thecc1EG021989 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2104702-2105701 Theobroma cacao
Thecc1EG021989 1.0kb downstream 1.0kb downstream 3045 true scaffold_5: 2101657-2104701 Theobroma cacao
Thecc1EG021989 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2101657-2102656 Theobroma cacao
Thecc1EG021989 2.0kb upstream 2.0kb upstream 4045 true scaffold_5: 2102657-2106701 Theobroma cacao
Thecc1EG021989 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2104702-2106701 Theobroma cacao
Thecc1EG021989 2.0kb downstream 2.0kb downstream 4045 true scaffold_5: 2100657-2104701 Theobroma cacao
Thecc1EG021989 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2100657-2102656 Theobroma cacao
Thecc1EG021989 5.0kb upstream 5.0kb upstream 7045 true scaffold_5: 2102657-2109701 Theobroma cacao
Thecc1EG021989 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2104702-2109701 Theobroma cacao
Thecc1EG021989 5.0kb downstream 5.0kb downstream 7045 true scaffold_5: 2097657-2104701 Theobroma cacao
Thecc1EG021989 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2097657-2102656 Theobroma cacao
Thecc1EG021989 10.0kb upstream 10.0kb upstream 12045 true scaffold_5: 2102657-2114701 Theobroma cacao
Thecc1EG021989 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2104702-2114701 Theobroma cacao
Thecc1EG021989 10.0kb downstream 10.0kb downstream 12045 true scaffold_5: 2092657-2104701 Theobroma cacao
Thecc1EG021989 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2092657-2102656 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841110 5264 Brassicales-Malvales View MSA
124351046 5266 SBM View MSA
124246660 5268 Malvidae View MSA
124069835 5270 Rosid View MSA
123743872 5271 Pentapetalae View MSA
122795043 5272 Eudicot View MSA
122048276 5273 Angiosperm View MSA
121310915 5274 Embryophyte View MSA
123348289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain