Gene : Thecc1EG021990 T. cacao v1.1
Defline:  (1 of 11) K11251 - histone H2A (H2A) Genomic Order:  428
Name:  ? Thecc1EG021990 Secondary Identifier:  ? PAC:27424889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021990 0.5kb upstream 0.5kb upstream 1775 true scaffold_5: 2106486-2108260 Theobroma cacao
Thecc1EG021990 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2106486-2106985 Theobroma cacao
Thecc1EG021990 0.5kb downstream 0.5kb downstream 1775 true scaffold_5: 2106986-2108760 Theobroma cacao
Thecc1EG021990 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2108261-2108760 Theobroma cacao
Thecc1EG021990 1.0kb upstream 1.0kb upstream 2275 true scaffold_5: 2105986-2108260 Theobroma cacao
Thecc1EG021990 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2105986-2106985 Theobroma cacao
Thecc1EG021990 1.0kb downstream 1.0kb downstream 2275 true scaffold_5: 2106986-2109260 Theobroma cacao
Thecc1EG021990 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2108261-2109260 Theobroma cacao
Thecc1EG021990 2.0kb upstream 2.0kb upstream 3275 true scaffold_5: 2104986-2108260 Theobroma cacao
Thecc1EG021990 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2104986-2106985 Theobroma cacao
Thecc1EG021990 2.0kb downstream 2.0kb downstream 3275 true scaffold_5: 2106986-2110260 Theobroma cacao
Thecc1EG021990 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2108261-2110260 Theobroma cacao
Thecc1EG021990 5.0kb upstream 5.0kb upstream 6275 true scaffold_5: 2101986-2108260 Theobroma cacao
Thecc1EG021990 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2101986-2106985 Theobroma cacao
Thecc1EG021990 5.0kb downstream 5.0kb downstream 6275 true scaffold_5: 2106986-2113260 Theobroma cacao
Thecc1EG021990 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2108261-2113260 Theobroma cacao
Thecc1EG021990 10.0kb upstream 10.0kb upstream 11275 true scaffold_5: 2096986-2108260 Theobroma cacao
Thecc1EG021990 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2096986-2106985 Theobroma cacao
Thecc1EG021990 10.0kb downstream 10.0kb downstream 11275 true scaffold_5: 2106986-2118260 Theobroma cacao
Thecc1EG021990 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2108261-2118260 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836855 5264 Brassicales-Malvales View MSA
124341930 5266 SBM View MSA
124246725 5268 Malvidae View MSA
124071077 5270 Rosid View MSA
123750361 5271 Pentapetalae View MSA
122788374 5272 Eudicot View MSA
122048599 5273 Angiosperm View MSA
121351397 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain