Gene : Thecc1EG021987 T. cacao v1.1
Defline:  (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  425
Name:  ? Thecc1EG021987 Secondary Identifier:  ? PAC:27420887
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021987 0.5kb upstream 0.5kb upstream 3736 true scaffold_5: 2092920-2096655 Theobroma cacao
Thecc1EG021987 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2092920-2093419 Theobroma cacao
Thecc1EG021987 0.5kb downstream 0.5kb downstream 3736 true scaffold_5: 2093420-2097155 Theobroma cacao
Thecc1EG021987 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2096656-2097155 Theobroma cacao
Thecc1EG021987 1.0kb upstream 1.0kb upstream 4236 true scaffold_5: 2092420-2096655 Theobroma cacao
Thecc1EG021987 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2092420-2093419 Theobroma cacao
Thecc1EG021987 1.0kb downstream 1.0kb downstream 4236 true scaffold_5: 2093420-2097655 Theobroma cacao
Thecc1EG021987 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2096656-2097655 Theobroma cacao
Thecc1EG021987 2.0kb upstream 2.0kb upstream 5236 true scaffold_5: 2091420-2096655 Theobroma cacao
Thecc1EG021987 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2091420-2093419 Theobroma cacao
Thecc1EG021987 2.0kb downstream 2.0kb downstream 5236 true scaffold_5: 2093420-2098655 Theobroma cacao
Thecc1EG021987 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2096656-2098655 Theobroma cacao
Thecc1EG021987 5.0kb upstream 5.0kb upstream 8236 true scaffold_5: 2088420-2096655 Theobroma cacao
Thecc1EG021987 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2088420-2093419 Theobroma cacao
Thecc1EG021987 5.0kb downstream 5.0kb downstream 8236 true scaffold_5: 2093420-2101655 Theobroma cacao
Thecc1EG021987 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2096656-2101655 Theobroma cacao
Thecc1EG021987 10.0kb upstream 10.0kb upstream 13236 true scaffold_5: 2083420-2096655 Theobroma cacao
Thecc1EG021987 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2083420-2093419 Theobroma cacao
Thecc1EG021987 10.0kb downstream 10.0kb downstream 13236 true scaffold_5: 2093420-2106655 Theobroma cacao
Thecc1EG021987 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2096656-2106655 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835858 5264 Brassicales-Malvales View MSA
124337003 5266 SBM View MSA
124244201 5268 Malvidae View MSA
124065656 5270 Rosid View MSA
123746310 5271 Pentapetalae View MSA
122791948 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain