Gene : Pavir.2KG570200 P. virgatum v4.1
Defline:  (1 of 2) PF00581//PF13616 - Rhodanese-like domain (Rhodanese) // PPIC-type PPIASE domain (Rotamase_3) Genomic Order:  5415
Name:  ? Pavir.2KG570200 Secondary Identifier:  ? PAC:37565817
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG570200 0.5kb upstream 0.5kb upstream 3735 true Chr02K: 93521971-93525705 Panicum virgatum
Pavir.2KG570200 0.5kb upstream 0.5kb upstream 500 false Chr02K: 93521971-93522470 Panicum virgatum
Pavir.2KG570200 0.5kb downstream 0.5kb downstream 3735 true Chr02K: 93522471-93526205 Panicum virgatum
Pavir.2KG570200 0.5kb downstream 0.5kb downstream 500 false Chr02K: 93525706-93526205 Panicum virgatum
Pavir.2KG570200 1.0kb upstream 1.0kb upstream 4235 true Chr02K: 93521471-93525705 Panicum virgatum
Pavir.2KG570200 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 93521471-93522470 Panicum virgatum
Pavir.2KG570200 1.0kb downstream 1.0kb downstream 4235 true Chr02K: 93522471-93526705 Panicum virgatum
Pavir.2KG570200 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 93525706-93526705 Panicum virgatum
Pavir.2KG570200 2.0kb upstream 2.0kb upstream 5235 true Chr02K: 93520471-93525705 Panicum virgatum
Pavir.2KG570200 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 93520471-93522470 Panicum virgatum
Pavir.2KG570200 2.0kb downstream 2.0kb downstream 5235 true Chr02K: 93522471-93527705 Panicum virgatum
Pavir.2KG570200 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 93525706-93527705 Panicum virgatum
Pavir.2KG570200 5.0kb upstream 5.0kb upstream 8235 true Chr02K: 93517471-93525705 Panicum virgatum
Pavir.2KG570200 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 93517471-93522470 Panicum virgatum
Pavir.2KG570200 5.0kb downstream 5.0kb downstream 8235 true Chr02K: 93522471-93530705 Panicum virgatum
Pavir.2KG570200 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 93525706-93530705 Panicum virgatum
Pavir.2KG570200 10.0kb upstream 10.0kb upstream 13235 true Chr02K: 93512471-93525705 Panicum virgatum
Pavir.2KG570200 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 93512471-93522470 Panicum virgatum
Pavir.2KG570200 10.0kb downstream 10.0kb downstream 13235 true Chr02K: 93522471-93535705 Panicum virgatum
Pavir.2KG570200 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 93525706-93535705 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122076887 5267 Panicoideae Singleton cluster - no MSA
124375679 5269 Grass Singleton cluster - no MSA
122041568 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121344744 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain