Gene : Pavir.2KG563700 P. virgatum v4.1
Defline:  (1 of 4) K12666 - oligosaccharyltransferase complex subunit alpha (ribophorin I) (OST1, RPN1) Genomic Order:  5117
Name:  ? Pavir.2KG563700 Secondary Identifier:  ? PAC:37568544
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG563700 0.5kb upstream 0.5kb upstream 4963 true Chr02K: 90301102-90306064 Panicum virgatum
Pavir.2KG563700 0.5kb upstream 0.5kb upstream 500 false Chr02K: 90301102-90301601 Panicum virgatum
Pavir.2KG563700 0.5kb downstream 0.5kb downstream 4963 true Chr02K: 90301602-90306564 Panicum virgatum
Pavir.2KG563700 0.5kb downstream 0.5kb downstream 500 false Chr02K: 90306065-90306564 Panicum virgatum
Pavir.2KG563700 1.0kb upstream 1.0kb upstream 5463 true Chr02K: 90300602-90306064 Panicum virgatum
Pavir.2KG563700 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 90300602-90301601 Panicum virgatum
Pavir.2KG563700 1.0kb downstream 1.0kb downstream 5463 true Chr02K: 90301602-90307064 Panicum virgatum
Pavir.2KG563700 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 90306065-90307064 Panicum virgatum
Pavir.2KG563700 2.0kb upstream 2.0kb upstream 6463 true Chr02K: 90299602-90306064 Panicum virgatum
Pavir.2KG563700 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 90299602-90301601 Panicum virgatum
Pavir.2KG563700 2.0kb downstream 2.0kb downstream 6463 true Chr02K: 90301602-90308064 Panicum virgatum
Pavir.2KG563700 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 90306065-90308064 Panicum virgatum
Pavir.2KG563700 5.0kb upstream 5.0kb upstream 9463 true Chr02K: 90296602-90306064 Panicum virgatum
Pavir.2KG563700 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 90296602-90301601 Panicum virgatum
Pavir.2KG563700 5.0kb downstream 5.0kb downstream 9463 true Chr02K: 90301602-90311064 Panicum virgatum
Pavir.2KG563700 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 90306065-90311064 Panicum virgatum
Pavir.2KG563700 10.0kb upstream 10.0kb upstream 14463 true Chr02K: 90291602-90306064 Panicum virgatum
Pavir.2KG563700 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 90291602-90301601 Panicum virgatum
Pavir.2KG563700 10.0kb downstream 10.0kb downstream 14463 true Chr02K: 90301602-90316064 Panicum virgatum
Pavir.2KG563700 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 90306065-90316064 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180910 5267 Panicoideae View MSA
124581029 5269 Grass View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain