Gene : Pavir.6KG236100 P. virgatum v4.1

Defline:  (1 of 2) PTHR10627//PTHR10627:SF43 - SCP160 // SUBFAMILY NOT NAMED Genomic Order:  2127
Name:  ? Pavir.6KG236100 Secondary Identifier:  ? PAC:37691767

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG236100 0.5kb upstream 0.5kb upstream 2894 true Chr06K: 48872299-48875192 Panicum virgatum
Pavir.6KG236100 0.5kb upstream 0.5kb upstream 500 false Chr06K: 48872299-48872798 Panicum virgatum
Pavir.6KG236100 0.5kb downstream 0.5kb downstream 2894 true Chr06K: 48872799-48875692 Panicum virgatum
Pavir.6KG236100 0.5kb downstream 0.5kb downstream 500 false Chr06K: 48875193-48875692 Panicum virgatum
Pavir.6KG236100 1.0kb upstream 1.0kb upstream 3394 true Chr06K: 48871799-48875192 Panicum virgatum
Pavir.6KG236100 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 48871799-48872798 Panicum virgatum
Pavir.6KG236100 1.0kb downstream 1.0kb downstream 3394 true Chr06K: 48872799-48876192 Panicum virgatum
Pavir.6KG236100 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 48875193-48876192 Panicum virgatum
Pavir.6KG236100 2.0kb upstream 2.0kb upstream 4394 true Chr06K: 48870799-48875192 Panicum virgatum
Pavir.6KG236100 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 48870799-48872798 Panicum virgatum
Pavir.6KG236100 2.0kb downstream 2.0kb downstream 4394 true Chr06K: 48872799-48877192 Panicum virgatum
Pavir.6KG236100 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 48875193-48877192 Panicum virgatum
Pavir.6KG236100 5.0kb upstream 5.0kb upstream 7394 true Chr06K: 48867799-48875192 Panicum virgatum
Pavir.6KG236100 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 48867799-48872798 Panicum virgatum
Pavir.6KG236100 5.0kb downstream 5.0kb downstream 7394 true Chr06K: 48872799-48880192 Panicum virgatum
Pavir.6KG236100 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 48875193-48880192 Panicum virgatum
Pavir.6KG236100 10.0kb upstream 10.0kb upstream 12394 true Chr06K: 48862799-48875192 Panicum virgatum
Pavir.6KG236100 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 48862799-48872798 Panicum virgatum
Pavir.6KG236100 10.0kb downstream 10.0kb downstream 12394 true Chr06K: 48872799-48885192 Panicum virgatum
Pavir.6KG236100 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 48875193-48885192 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196355 5267 Panicoideae View MSA
124576199 5269 Grass View MSA
122048117 5273 Angiosperm View MSA
121310853 5274 Embryophyte View MSA
123348238 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain