Gene : Thecc1EG021968 T. cacao v1.1
Defline:  (1 of 2) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  406
Name:  ? Thecc1EG021968 Secondary Identifier:  ? PAC:27421241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021968 0.5kb upstream 0.5kb upstream 4695 true scaffold_5: 1984698-1989392 Theobroma cacao
Thecc1EG021968 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1984698-1985197 Theobroma cacao
Thecc1EG021968 0.5kb downstream 0.5kb downstream 4695 true scaffold_5: 1985198-1989892 Theobroma cacao
Thecc1EG021968 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1989393-1989892 Theobroma cacao
Thecc1EG021968 1.0kb upstream 1.0kb upstream 5195 true scaffold_5: 1984198-1989392 Theobroma cacao
Thecc1EG021968 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1984198-1985197 Theobroma cacao
Thecc1EG021968 1.0kb downstream 1.0kb downstream 5195 true scaffold_5: 1985198-1990392 Theobroma cacao
Thecc1EG021968 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1989393-1990392 Theobroma cacao
Thecc1EG021968 2.0kb upstream 2.0kb upstream 6195 true scaffold_5: 1983198-1989392 Theobroma cacao
Thecc1EG021968 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1983198-1985197 Theobroma cacao
Thecc1EG021968 2.0kb downstream 2.0kb downstream 6195 true scaffold_5: 1985198-1991392 Theobroma cacao
Thecc1EG021968 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1989393-1991392 Theobroma cacao
Thecc1EG021968 5.0kb upstream 5.0kb upstream 9195 true scaffold_5: 1980198-1989392 Theobroma cacao
Thecc1EG021968 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1980198-1985197 Theobroma cacao
Thecc1EG021968 5.0kb downstream 5.0kb downstream 9195 true scaffold_5: 1985198-1994392 Theobroma cacao
Thecc1EG021968 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1989393-1994392 Theobroma cacao
Thecc1EG021968 10.0kb upstream 10.0kb upstream 14195 true scaffold_5: 1975198-1989392 Theobroma cacao
Thecc1EG021968 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1975198-1985197 Theobroma cacao
Thecc1EG021968 10.0kb downstream 10.0kb downstream 14195 true scaffold_5: 1985198-1999392 Theobroma cacao
Thecc1EG021968 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1989393-1999392 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829774 5264 Brassicales-Malvales View MSA
124321628 5266 SBM View MSA
124247993 5268 Malvidae View MSA
124066447 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain