Gene : Thecc1EG022270 T. cacao v1.1
Defline:  (1 of 1) PTHR23293:SF9 - FAD SYNTHASE Genomic Order:  658
Name:  ? Thecc1EG022270 Secondary Identifier:  ? PAC:27422215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao RIBOSYN2-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022270 0.5kb upstream 0.5kb upstream 7152 true scaffold_5: 3511570-3518721 Theobroma cacao
Thecc1EG022270 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3518222-3518721 Theobroma cacao
Thecc1EG022270 0.5kb downstream 0.5kb downstream 7152 true scaffold_5: 3511070-3518221 Theobroma cacao
Thecc1EG022270 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3511070-3511569 Theobroma cacao
Thecc1EG022270 1.0kb upstream 1.0kb upstream 7652 true scaffold_5: 3511570-3519221 Theobroma cacao
Thecc1EG022270 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3518222-3519221 Theobroma cacao
Thecc1EG022270 1.0kb downstream 1.0kb downstream 7652 true scaffold_5: 3510570-3518221 Theobroma cacao
Thecc1EG022270 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3510570-3511569 Theobroma cacao
Thecc1EG022270 2.0kb upstream 2.0kb upstream 8652 true scaffold_5: 3511570-3520221 Theobroma cacao
Thecc1EG022270 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3518222-3520221 Theobroma cacao
Thecc1EG022270 2.0kb downstream 2.0kb downstream 8652 true scaffold_5: 3509570-3518221 Theobroma cacao
Thecc1EG022270 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3509570-3511569 Theobroma cacao
Thecc1EG022270 5.0kb upstream 5.0kb upstream 11652 true scaffold_5: 3511570-3523221 Theobroma cacao
Thecc1EG022270 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3518222-3523221 Theobroma cacao
Thecc1EG022270 5.0kb downstream 5.0kb downstream 11652 true scaffold_5: 3506570-3518221 Theobroma cacao
Thecc1EG022270 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3506570-3511569 Theobroma cacao
Thecc1EG022270 10.0kb upstream 10.0kb upstream 16652 true scaffold_5: 3511570-3528221 Theobroma cacao
Thecc1EG022270 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3518222-3528221 Theobroma cacao
Thecc1EG022270 10.0kb downstream 10.0kb downstream 16652 true scaffold_5: 3501570-3518221 Theobroma cacao
Thecc1EG022270 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3501570-3511569 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834209 5264 Brassicales-Malvales View MSA
124344430 5266 SBM View MSA
124239927 5268 Malvidae View MSA
124066901 5270 Rosid View MSA
123737491 5271 Pentapetalae View MSA
122769895 5272 Eudicot View MSA
122049798 5273 Angiosperm View MSA
121344639 5274 Embryophyte View MSA
123427825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain