Gene : Pavir.J650500 P. virgatum v4.1
Defline:  (1 of 3) PTHR22600:SF16 - BETA-HEXOSAMINIDASE 1 Genomic Order:  1
Name:  ? Pavir.J650500 Secondary Identifier:  ? PAC:37639616
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6902 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J650500 0.5kb upstream 0.5kb upstream 7080 true scaffold_6615: 1385-8464 Panicum virgatum
Pavir.J650500 0.5kb upstream 0.5kb upstream 500 false scaffold_6615: 1385-1884 Panicum virgatum
Pavir.J650500 0.5kb downstream 0.5kb downstream 6929 true scaffold_6615: 1885-8813 Panicum virgatum
Pavir.J650500 0.5kb downstream 0.5kb downstream 349 false scaffold_6615: 8465-8813 Panicum virgatum
Pavir.J650500 1.0kb upstream 1.0kb upstream 7580 true scaffold_6615: 885-8464 Panicum virgatum
Pavir.J650500 1.0kb upstream 1.0kb upstream 1000 false scaffold_6615: 885-1884 Panicum virgatum
Pavir.J650500 1.0kb downstream 1.0kb downstream 6929 true scaffold_6615: 1885-8813 Panicum virgatum
Pavir.J650500 1.0kb downstream 1.0kb downstream 349 false scaffold_6615: 8465-8813 Panicum virgatum
Pavir.J650500 2.0kb upstream 2.0kb upstream 8464 true scaffold_6615: 1-8464 Panicum virgatum
Pavir.J650500 2.0kb upstream 2.0kb upstream 1884 false scaffold_6615: 1-1884 Panicum virgatum
Pavir.J650500 2.0kb downstream 2.0kb downstream 6929 true scaffold_6615: 1885-8813 Panicum virgatum
Pavir.J650500 2.0kb downstream 2.0kb downstream 349 false scaffold_6615: 8465-8813 Panicum virgatum
Pavir.J650500 5.0kb upstream 5.0kb upstream 8464 true scaffold_6615: 1-8464 Panicum virgatum
Pavir.J650500 5.0kb upstream 5.0kb upstream 1884 false scaffold_6615: 1-1884 Panicum virgatum
Pavir.J650500 5.0kb downstream 5.0kb downstream 6929 true scaffold_6615: 1885-8813 Panicum virgatum
Pavir.J650500 5.0kb downstream 5.0kb downstream 349 false scaffold_6615: 8465-8813 Panicum virgatum
Pavir.J650500 10.0kb upstream 10.0kb upstream 8464 true scaffold_6615: 1-8464 Panicum virgatum
Pavir.J650500 10.0kb upstream 10.0kb upstream 1884 false scaffold_6615: 1-1884 Panicum virgatum
Pavir.J650500 10.0kb downstream 10.0kb downstream 6929 true scaffold_6615: 1885-8813 Panicum virgatum
Pavir.J650500 10.0kb downstream 10.0kb downstream 349 false scaffold_6615: 8465-8813 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182822 5267 Panicoideae View MSA
124574726 5269 Grass View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain