Gene : Thecc1EG022244 T. cacao v1.1

Defline:  (1 of 1) PTHR24221//PTHR24221:SF119 - FAMILY NOT NAMED // ABC TRANSPORTER B FAMILY MEMBER 1 Genomic Order:  646
Name:  ? Thecc1EG022244 Secondary Identifier:  ? PAC:27421868

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022244 0.5kb upstream 0.5kb upstream 8235 true scaffold_5: 3343947-3352181 Theobroma cacao
Thecc1EG022244 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3351682-3352181 Theobroma cacao
Thecc1EG022244 0.5kb downstream 0.5kb downstream 8235 true scaffold_5: 3343447-3351681 Theobroma cacao
Thecc1EG022244 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3343447-3343946 Theobroma cacao
Thecc1EG022244 1.0kb upstream 1.0kb upstream 8735 true scaffold_5: 3343947-3352681 Theobroma cacao
Thecc1EG022244 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3351682-3352681 Theobroma cacao
Thecc1EG022244 1.0kb downstream 1.0kb downstream 8735 true scaffold_5: 3342947-3351681 Theobroma cacao
Thecc1EG022244 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3342947-3343946 Theobroma cacao
Thecc1EG022244 2.0kb upstream 2.0kb upstream 9735 true scaffold_5: 3343947-3353681 Theobroma cacao
Thecc1EG022244 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3351682-3353681 Theobroma cacao
Thecc1EG022244 2.0kb downstream 2.0kb downstream 9735 true scaffold_5: 3341947-3351681 Theobroma cacao
Thecc1EG022244 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3341947-3343946 Theobroma cacao
Thecc1EG022244 5.0kb upstream 5.0kb upstream 12735 true scaffold_5: 3343947-3356681 Theobroma cacao
Thecc1EG022244 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3351682-3356681 Theobroma cacao
Thecc1EG022244 5.0kb downstream 5.0kb downstream 12735 true scaffold_5: 3338947-3351681 Theobroma cacao
Thecc1EG022244 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3338947-3343946 Theobroma cacao
Thecc1EG022244 10.0kb upstream 10.0kb upstream 17735 true scaffold_5: 3343947-3361681 Theobroma cacao
Thecc1EG022244 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3351682-3361681 Theobroma cacao
Thecc1EG022244 10.0kb downstream 10.0kb downstream 17735 true scaffold_5: 3333947-3351681 Theobroma cacao
Thecc1EG022244 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3333947-3343946 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838012 5264 Brassicales-Malvales View MSA
124345264 5266 SBM View MSA
124243125 5268 Malvidae View MSA
124068120 5270 Rosid View MSA
123742106 5271 Pentapetalae View MSA
122796466 5272 Eudicot View MSA
122044866 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350880 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain