Gene : Thecc1EG022208 T. cacao v1.1
Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  619
Name:  ? Thecc1EG022208 Secondary Identifier:  ? PAC:27421791
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ANAEROFRUCAT-PWY Theobroma cacao pathologic  
Tcacao ANAGLYCOLYSIS-PWY Theobroma cacao pathologic  
Tcacao CALVIN-PWY Theobroma cacao pathologic  
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-1042 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY66-399 Theobroma cacao pathologic  
Tcacao SUCSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022208 0.5kb upstream 0.5kb upstream 7084 true scaffold_5: 3156428-3163511 Theobroma cacao
Thecc1EG022208 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3163012-3163511 Theobroma cacao
Thecc1EG022208 0.5kb downstream 0.5kb downstream 7084 true scaffold_5: 3155928-3163011 Theobroma cacao
Thecc1EG022208 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3155928-3156427 Theobroma cacao
Thecc1EG022208 1.0kb upstream 1.0kb upstream 7584 true scaffold_5: 3156428-3164011 Theobroma cacao
Thecc1EG022208 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3163012-3164011 Theobroma cacao
Thecc1EG022208 1.0kb downstream 1.0kb downstream 7584 true scaffold_5: 3155428-3163011 Theobroma cacao
Thecc1EG022208 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3155428-3156427 Theobroma cacao
Thecc1EG022208 2.0kb upstream 2.0kb upstream 8584 true scaffold_5: 3156428-3165011 Theobroma cacao
Thecc1EG022208 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3163012-3165011 Theobroma cacao
Thecc1EG022208 2.0kb downstream 2.0kb downstream 8584 true scaffold_5: 3154428-3163011 Theobroma cacao
Thecc1EG022208 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3154428-3156427 Theobroma cacao
Thecc1EG022208 5.0kb upstream 5.0kb upstream 11584 true scaffold_5: 3156428-3168011 Theobroma cacao
Thecc1EG022208 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3163012-3168011 Theobroma cacao
Thecc1EG022208 5.0kb downstream 5.0kb downstream 11584 true scaffold_5: 3151428-3163011 Theobroma cacao
Thecc1EG022208 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3151428-3156427 Theobroma cacao
Thecc1EG022208 10.0kb upstream 10.0kb upstream 16584 true scaffold_5: 3156428-3173011 Theobroma cacao
Thecc1EG022208 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3163012-3173011 Theobroma cacao
Thecc1EG022208 10.0kb downstream 10.0kb downstream 16584 true scaffold_5: 3146428-3163011 Theobroma cacao
Thecc1EG022208 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3146428-3156427 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824703 5264 Brassicales-Malvales View MSA
124347377 5266 SBM View MSA
124246185 5268 Malvidae View MSA
124069828 5270 Rosid View MSA
123742375 5271 Pentapetalae View MSA
122794772 5272 Eudicot View MSA
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain