Gene : Pavir.9KG129300 P. virgatum v4.1
Defline:  (1 of 5) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1145
Name:  ? Pavir.9KG129300 Secondary Identifier:  ? PAC:37674799
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5129 Panicum virgatum pathologic  
Pvirgatum PWY-6483 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9KG129300 0.5kb upstream 0.5kb upstream 8512 true Chr09K: 11732620-11741131 Panicum virgatum
Pavir.9KG129300 0.5kb upstream 0.5kb upstream 500 false Chr09K: 11740632-11741131 Panicum virgatum
Pavir.9KG129300 0.5kb downstream 0.5kb downstream 8512 true Chr09K: 11732120-11740631 Panicum virgatum
Pavir.9KG129300 0.5kb downstream 0.5kb downstream 500 false Chr09K: 11732120-11732619 Panicum virgatum
Pavir.9KG129300 1.0kb upstream 1.0kb upstream 9012 true Chr09K: 11732620-11741631 Panicum virgatum
Pavir.9KG129300 1.0kb upstream 1.0kb upstream 1000 false Chr09K: 11740632-11741631 Panicum virgatum
Pavir.9KG129300 1.0kb downstream 1.0kb downstream 9012 true Chr09K: 11731620-11740631 Panicum virgatum
Pavir.9KG129300 1.0kb downstream 1.0kb downstream 1000 false Chr09K: 11731620-11732619 Panicum virgatum
Pavir.9KG129300 2.0kb upstream 2.0kb upstream 10012 true Chr09K: 11732620-11742631 Panicum virgatum
Pavir.9KG129300 2.0kb upstream 2.0kb upstream 2000 false Chr09K: 11740632-11742631 Panicum virgatum
Pavir.9KG129300 2.0kb downstream 2.0kb downstream 10012 true Chr09K: 11730620-11740631 Panicum virgatum
Pavir.9KG129300 2.0kb downstream 2.0kb downstream 2000 false Chr09K: 11730620-11732619 Panicum virgatum
Pavir.9KG129300 5.0kb upstream 5.0kb upstream 13012 true Chr09K: 11732620-11745631 Panicum virgatum
Pavir.9KG129300 5.0kb upstream 5.0kb upstream 5000 false Chr09K: 11740632-11745631 Panicum virgatum
Pavir.9KG129300 5.0kb downstream 5.0kb downstream 13012 true Chr09K: 11727620-11740631 Panicum virgatum
Pavir.9KG129300 5.0kb downstream 5.0kb downstream 5000 false Chr09K: 11727620-11732619 Panicum virgatum
Pavir.9KG129300 10.0kb upstream 10.0kb upstream 18012 true Chr09K: 11732620-11750631 Panicum virgatum
Pavir.9KG129300 10.0kb upstream 10.0kb upstream 10000 false Chr09K: 11740632-11750631 Panicum virgatum
Pavir.9KG129300 10.0kb downstream 10.0kb downstream 18012 true Chr09K: 11722620-11740631 Panicum virgatum
Pavir.9KG129300 10.0kb downstream 10.0kb downstream 10000 false Chr09K: 11722620-11732619 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187978 5267 Panicoideae View MSA
124577757 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain