Gene : Thecc1EG022191 T. cacao v1.1

Defline:  (1 of 1) PTHR10741//PTHR10741:SF2 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN Genomic Order:  605
Name:  ? Thecc1EG022191 Secondary Identifier:  ? PAC:27421383

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022191 0.5kb upstream 0.5kb upstream 3069 true scaffold_5: 3078474-3081542 Theobroma cacao
Thecc1EG022191 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3081043-3081542 Theobroma cacao
Thecc1EG022191 0.5kb downstream 0.5kb downstream 3069 true scaffold_5: 3077974-3081042 Theobroma cacao
Thecc1EG022191 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3077974-3078473 Theobroma cacao
Thecc1EG022191 1.0kb upstream 1.0kb upstream 3569 true scaffold_5: 3078474-3082042 Theobroma cacao
Thecc1EG022191 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3081043-3082042 Theobroma cacao
Thecc1EG022191 1.0kb downstream 1.0kb downstream 3569 true scaffold_5: 3077474-3081042 Theobroma cacao
Thecc1EG022191 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3077474-3078473 Theobroma cacao
Thecc1EG022191 2.0kb upstream 2.0kb upstream 4569 true scaffold_5: 3078474-3083042 Theobroma cacao
Thecc1EG022191 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3081043-3083042 Theobroma cacao
Thecc1EG022191 2.0kb downstream 2.0kb downstream 4569 true scaffold_5: 3076474-3081042 Theobroma cacao
Thecc1EG022191 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3076474-3078473 Theobroma cacao
Thecc1EG022191 5.0kb upstream 5.0kb upstream 7569 true scaffold_5: 3078474-3086042 Theobroma cacao
Thecc1EG022191 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3081043-3086042 Theobroma cacao
Thecc1EG022191 5.0kb downstream 5.0kb downstream 7569 true scaffold_5: 3073474-3081042 Theobroma cacao
Thecc1EG022191 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3073474-3078473 Theobroma cacao
Thecc1EG022191 10.0kb upstream 10.0kb upstream 12569 true scaffold_5: 3078474-3091042 Theobroma cacao
Thecc1EG022191 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3081043-3091042 Theobroma cacao
Thecc1EG022191 10.0kb downstream 10.0kb downstream 12569 true scaffold_5: 3068474-3081042 Theobroma cacao
Thecc1EG022191 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3068474-3078473 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829891 5264 Brassicales-Malvales View MSA
124321635 5266 SBM View MSA
124242530 5268 Malvidae View MSA
124066940 5270 Rosid View MSA
123747693 5271 Pentapetalae View MSA
122792898 5272 Eudicot View MSA
122045225 5273 Angiosperm View MSA
121345043 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain