Gene : Thecc1EG022179 T. cacao v1.1
Defline:  (1 of 3) 4.3.1.24 - Phenylalanine ammonia-lyase Genomic Order:  594
Name:  ? Thecc1EG022179 Secondary Identifier:  ? PAC:27423740
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY1F-467 Theobroma cacao pathologic  
Tcacao PWY-7186 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022179 0.5kb upstream 0.5kb upstream 4329 true scaffold_5: 3020050-3024378 Theobroma cacao
Thecc1EG022179 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3020050-3020549 Theobroma cacao
Thecc1EG022179 0.5kb downstream 0.5kb downstream 4329 true scaffold_5: 3020550-3024878 Theobroma cacao
Thecc1EG022179 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3024379-3024878 Theobroma cacao
Thecc1EG022179 1.0kb upstream 1.0kb upstream 4829 true scaffold_5: 3019550-3024378 Theobroma cacao
Thecc1EG022179 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3019550-3020549 Theobroma cacao
Thecc1EG022179 1.0kb downstream 1.0kb downstream 4829 true scaffold_5: 3020550-3025378 Theobroma cacao
Thecc1EG022179 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3024379-3025378 Theobroma cacao
Thecc1EG022179 2.0kb upstream 2.0kb upstream 5829 true scaffold_5: 3018550-3024378 Theobroma cacao
Thecc1EG022179 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3018550-3020549 Theobroma cacao
Thecc1EG022179 2.0kb downstream 2.0kb downstream 5829 true scaffold_5: 3020550-3026378 Theobroma cacao
Thecc1EG022179 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3024379-3026378 Theobroma cacao
Thecc1EG022179 5.0kb upstream 5.0kb upstream 8829 true scaffold_5: 3015550-3024378 Theobroma cacao
Thecc1EG022179 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3015550-3020549 Theobroma cacao
Thecc1EG022179 5.0kb downstream 5.0kb downstream 8829 true scaffold_5: 3020550-3029378 Theobroma cacao
Thecc1EG022179 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3024379-3029378 Theobroma cacao
Thecc1EG022179 10.0kb upstream 10.0kb upstream 13829 true scaffold_5: 3010550-3024378 Theobroma cacao
Thecc1EG022179 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3010550-3020549 Theobroma cacao
Thecc1EG022179 10.0kb downstream 10.0kb downstream 13829 true scaffold_5: 3020550-3034378 Theobroma cacao
Thecc1EG022179 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3024379-3034378 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839790 5264 Brassicales-Malvales View MSA
124346801 5266 SBM View MSA
124254509 5268 Malvidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain