Gene : Thecc1EG022188 T. cacao v1.1

Defline:  Uncharacterized protein (52%P) Genomic Order:  602
Name:  ? Thecc1EG022188 Secondary Identifier:  ? PAC:27424942

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022188 0.5kb upstream 0.5kb upstream 1064 true scaffold_5: 3069670-3070733 Theobroma cacao
Thecc1EG022188 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3069670-3070169 Theobroma cacao
Thecc1EG022188 0.5kb downstream 0.5kb downstream 1064 true scaffold_5: 3070170-3071233 Theobroma cacao
Thecc1EG022188 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3070734-3071233 Theobroma cacao
Thecc1EG022188 1.0kb upstream 1.0kb upstream 1564 true scaffold_5: 3069170-3070733 Theobroma cacao
Thecc1EG022188 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3069170-3070169 Theobroma cacao
Thecc1EG022188 1.0kb downstream 1.0kb downstream 1564 true scaffold_5: 3070170-3071733 Theobroma cacao
Thecc1EG022188 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3070734-3071733 Theobroma cacao
Thecc1EG022188 2.0kb upstream 2.0kb upstream 2564 true scaffold_5: 3068170-3070733 Theobroma cacao
Thecc1EG022188 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3068170-3070169 Theobroma cacao
Thecc1EG022188 2.0kb downstream 2.0kb downstream 2564 true scaffold_5: 3070170-3072733 Theobroma cacao
Thecc1EG022188 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3070734-3072733 Theobroma cacao
Thecc1EG022188 5.0kb upstream 5.0kb upstream 5564 true scaffold_5: 3065170-3070733 Theobroma cacao
Thecc1EG022188 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3065170-3070169 Theobroma cacao
Thecc1EG022188 5.0kb downstream 5.0kb downstream 5564 true scaffold_5: 3070170-3075733 Theobroma cacao
Thecc1EG022188 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3070734-3075733 Theobroma cacao
Thecc1EG022188 10.0kb upstream 10.0kb upstream 10564 true scaffold_5: 3060170-3070733 Theobroma cacao
Thecc1EG022188 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3060170-3070169 Theobroma cacao
Thecc1EG022188 10.0kb downstream 10.0kb downstream 10564 true scaffold_5: 3070170-3080733 Theobroma cacao
Thecc1EG022188 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3070734-3080733 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792140 5273 Angiosperm View MSA
123838793 5264 Brassicales-Malvales View MSA
124348348 5266 SBM View MSA
124254519 5268 Malvidae View MSA
124063302 5270 Rosid View MSA
123747609 5271 Pentapetalae View MSA
122796574 5272 Eudicot View MSA
121063390 5274 Embryophyte View MSA
123103143 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain