Gene : Thecc1EG022167 T. cacao v1.1
Defline:  (1 of 5) PTHR11709:SF116 - LACCASE-11 Genomic Order:  585
Name:  ? Thecc1EG022167 Secondary Identifier:  ? PAC:27421032
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022167 0.5kb upstream 0.5kb upstream 6078 true scaffold_5: 2942847-2948924 Theobroma cacao
Thecc1EG022167 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2948425-2948924 Theobroma cacao
Thecc1EG022167 0.5kb downstream 0.5kb downstream 6078 true scaffold_5: 2942347-2948424 Theobroma cacao
Thecc1EG022167 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2942347-2942846 Theobroma cacao
Thecc1EG022167 1.0kb upstream 1.0kb upstream 6578 true scaffold_5: 2942847-2949424 Theobroma cacao
Thecc1EG022167 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2948425-2949424 Theobroma cacao
Thecc1EG022167 1.0kb downstream 1.0kb downstream 6578 true scaffold_5: 2941847-2948424 Theobroma cacao
Thecc1EG022167 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2941847-2942846 Theobroma cacao
Thecc1EG022167 2.0kb upstream 2.0kb upstream 7578 true scaffold_5: 2942847-2950424 Theobroma cacao
Thecc1EG022167 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2948425-2950424 Theobroma cacao
Thecc1EG022167 2.0kb downstream 2.0kb downstream 7578 true scaffold_5: 2940847-2948424 Theobroma cacao
Thecc1EG022167 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2940847-2942846 Theobroma cacao
Thecc1EG022167 5.0kb upstream 5.0kb upstream 10578 true scaffold_5: 2942847-2953424 Theobroma cacao
Thecc1EG022167 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2948425-2953424 Theobroma cacao
Thecc1EG022167 5.0kb downstream 5.0kb downstream 10578 true scaffold_5: 2937847-2948424 Theobroma cacao
Thecc1EG022167 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2937847-2942846 Theobroma cacao
Thecc1EG022167 10.0kb upstream 10.0kb upstream 15578 true scaffold_5: 2942847-2958424 Theobroma cacao
Thecc1EG022167 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2948425-2958424 Theobroma cacao
Thecc1EG022167 10.0kb downstream 10.0kb downstream 15578 true scaffold_5: 2932847-2948424 Theobroma cacao
Thecc1EG022167 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2932847-2942846 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820618 5264 Brassicales-Malvales Singleton cluster - no MSA
124316826 5266 SBM Singleton cluster - no MSA
124249368 5268 Malvidae View MSA
124074163 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain