Gene : Thecc1EG022173 T. cacao v1.1
Defline:  (1 of 2) PTHR10774:SF62 - SYNAPTOTAGMIN-3 Genomic Order:  589
Name:  ? Thecc1EG022173 Secondary Identifier:  ? PAC:27424828
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022173 0.5kb upstream 0.5kb upstream 7221 true scaffold_5: 2987852-2995072 Theobroma cacao
Thecc1EG022173 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2994573-2995072 Theobroma cacao
Thecc1EG022173 0.5kb downstream 0.5kb downstream 7221 true scaffold_5: 2987352-2994572 Theobroma cacao
Thecc1EG022173 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2987352-2987851 Theobroma cacao
Thecc1EG022173 1.0kb upstream 1.0kb upstream 7721 true scaffold_5: 2987852-2995572 Theobroma cacao
Thecc1EG022173 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2994573-2995572 Theobroma cacao
Thecc1EG022173 1.0kb downstream 1.0kb downstream 7721 true scaffold_5: 2986852-2994572 Theobroma cacao
Thecc1EG022173 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2986852-2987851 Theobroma cacao
Thecc1EG022173 2.0kb upstream 2.0kb upstream 8721 true scaffold_5: 2987852-2996572 Theobroma cacao
Thecc1EG022173 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2994573-2996572 Theobroma cacao
Thecc1EG022173 2.0kb downstream 2.0kb downstream 8721 true scaffold_5: 2985852-2994572 Theobroma cacao
Thecc1EG022173 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2985852-2987851 Theobroma cacao
Thecc1EG022173 5.0kb upstream 5.0kb upstream 11721 true scaffold_5: 2987852-2999572 Theobroma cacao
Thecc1EG022173 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2994573-2999572 Theobroma cacao
Thecc1EG022173 5.0kb downstream 5.0kb downstream 11721 true scaffold_5: 2982852-2994572 Theobroma cacao
Thecc1EG022173 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2982852-2987851 Theobroma cacao
Thecc1EG022173 10.0kb upstream 10.0kb upstream 16721 true scaffold_5: 2987852-3004572 Theobroma cacao
Thecc1EG022173 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2994573-3004572 Theobroma cacao
Thecc1EG022173 10.0kb downstream 10.0kb downstream 16721 true scaffold_5: 2977852-2994572 Theobroma cacao
Thecc1EG022173 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2977852-2987851 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819928 5264 Brassicales-Malvales Singleton cluster - no MSA
124316157 5266 SBM Singleton cluster - no MSA
124249087 5268 Malvidae View MSA
124074308 5270 Rosid View MSA
123738784 5271 Pentapetalae View MSA
122793705 5272 Eudicot View MSA
122046741 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121310651 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain