Gene : Pavir.9KG307200 P. virgatum v4.1
Defline:  (1 of 2) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  3108
Name:  ? Pavir.9KG307200 Secondary Identifier:  ? PAC:37673984
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6441 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9KG307200 0.5kb upstream 0.5kb upstream 9633 true Chr09K: 52384212-52393844 Panicum virgatum
Pavir.9KG307200 0.5kb upstream 0.5kb upstream 500 false Chr09K: 52393345-52393844 Panicum virgatum
Pavir.9KG307200 0.5kb downstream 0.5kb downstream 9633 true Chr09K: 52383712-52393344 Panicum virgatum
Pavir.9KG307200 0.5kb downstream 0.5kb downstream 500 false Chr09K: 52383712-52384211 Panicum virgatum
Pavir.9KG307200 1.0kb upstream 1.0kb upstream 10133 true Chr09K: 52384212-52394344 Panicum virgatum
Pavir.9KG307200 1.0kb upstream 1.0kb upstream 1000 false Chr09K: 52393345-52394344 Panicum virgatum
Pavir.9KG307200 1.0kb downstream 1.0kb downstream 10133 true Chr09K: 52383212-52393344 Panicum virgatum
Pavir.9KG307200 1.0kb downstream 1.0kb downstream 1000 false Chr09K: 52383212-52384211 Panicum virgatum
Pavir.9KG307200 2.0kb upstream 2.0kb upstream 11133 true Chr09K: 52384212-52395344 Panicum virgatum
Pavir.9KG307200 2.0kb upstream 2.0kb upstream 2000 false Chr09K: 52393345-52395344 Panicum virgatum
Pavir.9KG307200 2.0kb downstream 2.0kb downstream 11133 true Chr09K: 52382212-52393344 Panicum virgatum
Pavir.9KG307200 2.0kb downstream 2.0kb downstream 2000 false Chr09K: 52382212-52384211 Panicum virgatum
Pavir.9KG307200 5.0kb upstream 5.0kb upstream 14133 true Chr09K: 52384212-52398344 Panicum virgatum
Pavir.9KG307200 5.0kb upstream 5.0kb upstream 5000 false Chr09K: 52393345-52398344 Panicum virgatum
Pavir.9KG307200 5.0kb downstream 5.0kb downstream 14133 true Chr09K: 52379212-52393344 Panicum virgatum
Pavir.9KG307200 5.0kb downstream 5.0kb downstream 5000 false Chr09K: 52379212-52384211 Panicum virgatum
Pavir.9KG307200 10.0kb upstream 10.0kb upstream 19133 true Chr09K: 52384212-52403344 Panicum virgatum
Pavir.9KG307200 10.0kb upstream 10.0kb upstream 10000 false Chr09K: 52393345-52403344 Panicum virgatum
Pavir.9KG307200 10.0kb downstream 10.0kb downstream 19133 true Chr09K: 52374212-52393344 Panicum virgatum
Pavir.9KG307200 10.0kb downstream 10.0kb downstream 10000 false Chr09K: 52374212-52384211 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186700 5267 Panicoideae View MSA
124576158 5269 Grass View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain