Gene : Thecc1EG022119 T. cacao v1.1
Defline:  (1 of 18) K08472 - mlo protein (MLO) Genomic Order:  544
Name:  ? Thecc1EG022119 Secondary Identifier:  ? PAC:27422664
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022119 0.5kb upstream 0.5kb upstream 9986 true scaffold_5: 2704897-2714882 Theobroma cacao
Thecc1EG022119 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2714383-2714882 Theobroma cacao
Thecc1EG022119 0.5kb downstream 0.5kb downstream 9986 true scaffold_5: 2704397-2714382 Theobroma cacao
Thecc1EG022119 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2704397-2704896 Theobroma cacao
Thecc1EG022119 1.0kb upstream 1.0kb upstream 10486 true scaffold_5: 2704897-2715382 Theobroma cacao
Thecc1EG022119 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2714383-2715382 Theobroma cacao
Thecc1EG022119 1.0kb downstream 1.0kb downstream 10486 true scaffold_5: 2703897-2714382 Theobroma cacao
Thecc1EG022119 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2703897-2704896 Theobroma cacao
Thecc1EG022119 2.0kb upstream 2.0kb upstream 11486 true scaffold_5: 2704897-2716382 Theobroma cacao
Thecc1EG022119 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2714383-2716382 Theobroma cacao
Thecc1EG022119 2.0kb downstream 2.0kb downstream 11486 true scaffold_5: 2702897-2714382 Theobroma cacao
Thecc1EG022119 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2702897-2704896 Theobroma cacao
Thecc1EG022119 5.0kb upstream 5.0kb upstream 14486 true scaffold_5: 2704897-2719382 Theobroma cacao
Thecc1EG022119 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2714383-2719382 Theobroma cacao
Thecc1EG022119 5.0kb downstream 5.0kb downstream 14486 true scaffold_5: 2699897-2714382 Theobroma cacao
Thecc1EG022119 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2699897-2704896 Theobroma cacao
Thecc1EG022119 10.0kb upstream 10.0kb upstream 19486 true scaffold_5: 2704897-2724382 Theobroma cacao
Thecc1EG022119 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2714383-2724382 Theobroma cacao
Thecc1EG022119 10.0kb downstream 10.0kb downstream 19486 true scaffold_5: 2694897-2714382 Theobroma cacao
Thecc1EG022119 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2694897-2704896 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820343 5264 Brassicales-Malvales Singleton cluster - no MSA
124316561 5266 SBM Singleton cluster - no MSA
124248176 5268 Malvidae View MSA
124072355 5270 Rosid View MSA
123737191 5271 Pentapetalae View MSA
122795625 5272 Eudicot View MSA
122050074 5273 Angiosperm View MSA
121311724 5274 Embryophyte View MSA
123348984 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain