Gene : Pavir.9KG301800 P. virgatum v4.1
Defline:  (1 of 6) 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Genomic Order:  3153
Name:  ? Pavir.9KG301800 Secondary Identifier:  ? PAC:37669533
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7560 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9KG301800 0.5kb upstream 0.5kb upstream 5528 true Chr09K: 53884499-53890026 Panicum virgatum
Pavir.9KG301800 0.5kb upstream 0.5kb upstream 500 false Chr09K: 53884499-53884998 Panicum virgatum
Pavir.9KG301800 0.5kb downstream 0.5kb downstream 5528 true Chr09K: 53884999-53890526 Panicum virgatum
Pavir.9KG301800 0.5kb downstream 0.5kb downstream 500 false Chr09K: 53890027-53890526 Panicum virgatum
Pavir.9KG301800 1.0kb upstream 1.0kb upstream 6028 true Chr09K: 53883999-53890026 Panicum virgatum
Pavir.9KG301800 1.0kb upstream 1.0kb upstream 1000 false Chr09K: 53883999-53884998 Panicum virgatum
Pavir.9KG301800 1.0kb downstream 1.0kb downstream 6028 true Chr09K: 53884999-53891026 Panicum virgatum
Pavir.9KG301800 1.0kb downstream 1.0kb downstream 1000 false Chr09K: 53890027-53891026 Panicum virgatum
Pavir.9KG301800 2.0kb upstream 2.0kb upstream 7028 true Chr09K: 53882999-53890026 Panicum virgatum
Pavir.9KG301800 2.0kb upstream 2.0kb upstream 2000 false Chr09K: 53882999-53884998 Panicum virgatum
Pavir.9KG301800 2.0kb downstream 2.0kb downstream 7028 true Chr09K: 53884999-53892026 Panicum virgatum
Pavir.9KG301800 2.0kb downstream 2.0kb downstream 2000 false Chr09K: 53890027-53892026 Panicum virgatum
Pavir.9KG301800 5.0kb upstream 5.0kb upstream 10028 true Chr09K: 53879999-53890026 Panicum virgatum
Pavir.9KG301800 5.0kb upstream 5.0kb upstream 5000 false Chr09K: 53879999-53884998 Panicum virgatum
Pavir.9KG301800 5.0kb downstream 5.0kb downstream 10028 true Chr09K: 53884999-53895026 Panicum virgatum
Pavir.9KG301800 5.0kb downstream 5.0kb downstream 5000 false Chr09K: 53890027-53895026 Panicum virgatum
Pavir.9KG301800 10.0kb upstream 10.0kb upstream 15028 true Chr09K: 53874999-53890026 Panicum virgatum
Pavir.9KG301800 10.0kb upstream 10.0kb upstream 10000 false Chr09K: 53874999-53884998 Panicum virgatum
Pavir.9KG301800 10.0kb downstream 10.0kb downstream 15028 true Chr09K: 53884999-53900026 Panicum virgatum
Pavir.9KG301800 10.0kb downstream 10.0kb downstream 10000 false Chr09K: 53890027-53900026 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185439 5267 Panicoideae View MSA
124576691 5269 Grass View MSA
122043887 5273 Angiosperm View MSA
121350299 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain