Gene : Thecc1EG022374 T. cacao v1.1
Defline:  (1 of 1) K10588 - ubiquitin-protein ligase E3 B (UBE3B) Genomic Order:  737
Name:  ? Thecc1EG022374 Secondary Identifier:  ? PAC:27424332
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022374 0.5kb upstream 0.5kb upstream 9012 true scaffold_5: 4182594-4191605 Theobroma cacao
Thecc1EG022374 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4191106-4191605 Theobroma cacao
Thecc1EG022374 0.5kb downstream 0.5kb downstream 9012 true scaffold_5: 4182094-4191105 Theobroma cacao
Thecc1EG022374 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4182094-4182593 Theobroma cacao
Thecc1EG022374 1.0kb upstream 1.0kb upstream 9512 true scaffold_5: 4182594-4192105 Theobroma cacao
Thecc1EG022374 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4191106-4192105 Theobroma cacao
Thecc1EG022374 1.0kb downstream 1.0kb downstream 9512 true scaffold_5: 4181594-4191105 Theobroma cacao
Thecc1EG022374 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4181594-4182593 Theobroma cacao
Thecc1EG022374 2.0kb upstream 2.0kb upstream 10512 true scaffold_5: 4182594-4193105 Theobroma cacao
Thecc1EG022374 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4191106-4193105 Theobroma cacao
Thecc1EG022374 2.0kb downstream 2.0kb downstream 10512 true scaffold_5: 4180594-4191105 Theobroma cacao
Thecc1EG022374 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4180594-4182593 Theobroma cacao
Thecc1EG022374 5.0kb upstream 5.0kb upstream 13512 true scaffold_5: 4182594-4196105 Theobroma cacao
Thecc1EG022374 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4191106-4196105 Theobroma cacao
Thecc1EG022374 5.0kb downstream 5.0kb downstream 13512 true scaffold_5: 4177594-4191105 Theobroma cacao
Thecc1EG022374 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4177594-4182593 Theobroma cacao
Thecc1EG022374 10.0kb upstream 10.0kb upstream 18512 true scaffold_5: 4182594-4201105 Theobroma cacao
Thecc1EG022374 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4191106-4201105 Theobroma cacao
Thecc1EG022374 10.0kb downstream 10.0kb downstream 18512 true scaffold_5: 4172594-4191105 Theobroma cacao
Thecc1EG022374 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4172594-4182593 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827587 5264 Brassicales-Malvales View MSA
124346572 5266 SBM View MSA
124252639 5268 Malvidae View MSA
124065760 5270 Rosid View MSA
123737097 5271 Pentapetalae View MSA
122793139 5272 Eudicot View MSA
122047566 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121351552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain