Gene : Thecc1EG022383 T. cacao v1.1
Defline:  (1 of 1) PTHR23241//PTHR23241:SF49 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED // COLD-REGULATED PROTEIN 15B Genomic Order:  745
Name:  ? Thecc1EG022383 Secondary Identifier:  ? PAC:27422149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022383 0.5kb upstream 0.5kb upstream 2644 true scaffold_5: 4228455-4231098 Theobroma cacao
Thecc1EG022383 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4228455-4228954 Theobroma cacao
Thecc1EG022383 0.5kb downstream 0.5kb downstream 2644 true scaffold_5: 4228955-4231598 Theobroma cacao
Thecc1EG022383 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4231099-4231598 Theobroma cacao
Thecc1EG022383 1.0kb upstream 1.0kb upstream 3144 true scaffold_5: 4227955-4231098 Theobroma cacao
Thecc1EG022383 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4227955-4228954 Theobroma cacao
Thecc1EG022383 1.0kb downstream 1.0kb downstream 3144 true scaffold_5: 4228955-4232098 Theobroma cacao
Thecc1EG022383 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4231099-4232098 Theobroma cacao
Thecc1EG022383 2.0kb upstream 2.0kb upstream 4144 true scaffold_5: 4226955-4231098 Theobroma cacao
Thecc1EG022383 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4226955-4228954 Theobroma cacao
Thecc1EG022383 2.0kb downstream 2.0kb downstream 4144 true scaffold_5: 4228955-4233098 Theobroma cacao
Thecc1EG022383 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4231099-4233098 Theobroma cacao
Thecc1EG022383 5.0kb upstream 5.0kb upstream 7144 true scaffold_5: 4223955-4231098 Theobroma cacao
Thecc1EG022383 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4223955-4228954 Theobroma cacao
Thecc1EG022383 5.0kb downstream 5.0kb downstream 7144 true scaffold_5: 4228955-4236098 Theobroma cacao
Thecc1EG022383 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4231099-4236098 Theobroma cacao
Thecc1EG022383 10.0kb upstream 10.0kb upstream 12144 true scaffold_5: 4218955-4231098 Theobroma cacao
Thecc1EG022383 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4218955-4228954 Theobroma cacao
Thecc1EG022383 10.0kb downstream 10.0kb downstream 12144 true scaffold_5: 4228955-4241098 Theobroma cacao
Thecc1EG022383 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4231099-4241098 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838811 5264 Brassicales-Malvales View MSA
124341968 5266 SBM View MSA
124253564 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain