Gene : Thecc1EG022370 T. cacao v1.1

Defline:  (1 of 1) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC Genomic Order:  733
Name:  ? Thecc1EG022370 Secondary Identifier:  ? PAC:27425367

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022370 0.5kb upstream 0.5kb upstream 5720 true scaffold_5: 4163342-4169061 Theobroma cacao
Thecc1EG022370 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4168562-4169061 Theobroma cacao
Thecc1EG022370 0.5kb downstream 0.5kb downstream 5720 true scaffold_5: 4162842-4168561 Theobroma cacao
Thecc1EG022370 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4162842-4163341 Theobroma cacao
Thecc1EG022370 1.0kb upstream 1.0kb upstream 6220 true scaffold_5: 4163342-4169561 Theobroma cacao
Thecc1EG022370 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4168562-4169561 Theobroma cacao
Thecc1EG022370 1.0kb downstream 1.0kb downstream 6220 true scaffold_5: 4162342-4168561 Theobroma cacao
Thecc1EG022370 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4162342-4163341 Theobroma cacao
Thecc1EG022370 2.0kb upstream 2.0kb upstream 7220 true scaffold_5: 4163342-4170561 Theobroma cacao
Thecc1EG022370 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4168562-4170561 Theobroma cacao
Thecc1EG022370 2.0kb downstream 2.0kb downstream 7220 true scaffold_5: 4161342-4168561 Theobroma cacao
Thecc1EG022370 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4161342-4163341 Theobroma cacao
Thecc1EG022370 5.0kb upstream 5.0kb upstream 10220 true scaffold_5: 4163342-4173561 Theobroma cacao
Thecc1EG022370 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4168562-4173561 Theobroma cacao
Thecc1EG022370 5.0kb downstream 5.0kb downstream 10220 true scaffold_5: 4158342-4168561 Theobroma cacao
Thecc1EG022370 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4158342-4163341 Theobroma cacao
Thecc1EG022370 10.0kb upstream 10.0kb upstream 15220 true scaffold_5: 4163342-4178561 Theobroma cacao
Thecc1EG022370 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4168562-4178561 Theobroma cacao
Thecc1EG022370 10.0kb downstream 10.0kb downstream 15220 true scaffold_5: 4153342-4168561 Theobroma cacao
Thecc1EG022370 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4153342-4163341 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833940 5264 Brassicales-Malvales View MSA
124340496 5266 SBM View MSA
124243766 5268 Malvidae View MSA
124067808 5270 Rosid View MSA
123739140 5271 Pentapetalae View MSA
122789715 5272 Eudicot View MSA
122047371 5273 Angiosperm View MSA
121347263 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain