Gene : Thecc1EG022372 T. cacao v1.1
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  735
Name:  ? Thecc1EG022372 Secondary Identifier:  ? PAC:27422411
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao BRANCHED-CHAIN-AA-SYN-PWY Theobroma cacao pathologic  
Tcacao ILEUSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3001 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022372 0.5kb upstream 0.5kb upstream 6315 true scaffold_5: 4173844-4180158 Theobroma cacao
Thecc1EG022372 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4173844-4174343 Theobroma cacao
Thecc1EG022372 0.5kb downstream 0.5kb downstream 6315 true scaffold_5: 4174344-4180658 Theobroma cacao
Thecc1EG022372 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4180159-4180658 Theobroma cacao
Thecc1EG022372 1.0kb upstream 1.0kb upstream 6815 true scaffold_5: 4173344-4180158 Theobroma cacao
Thecc1EG022372 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4173344-4174343 Theobroma cacao
Thecc1EG022372 1.0kb downstream 1.0kb downstream 6815 true scaffold_5: 4174344-4181158 Theobroma cacao
Thecc1EG022372 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4180159-4181158 Theobroma cacao
Thecc1EG022372 2.0kb upstream 2.0kb upstream 7815 true scaffold_5: 4172344-4180158 Theobroma cacao
Thecc1EG022372 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4172344-4174343 Theobroma cacao
Thecc1EG022372 2.0kb downstream 2.0kb downstream 7815 true scaffold_5: 4174344-4182158 Theobroma cacao
Thecc1EG022372 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4180159-4182158 Theobroma cacao
Thecc1EG022372 5.0kb upstream 5.0kb upstream 10815 true scaffold_5: 4169344-4180158 Theobroma cacao
Thecc1EG022372 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4169344-4174343 Theobroma cacao
Thecc1EG022372 5.0kb downstream 5.0kb downstream 10815 true scaffold_5: 4174344-4185158 Theobroma cacao
Thecc1EG022372 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4180159-4185158 Theobroma cacao
Thecc1EG022372 10.0kb upstream 10.0kb upstream 15815 true scaffold_5: 4164344-4180158 Theobroma cacao
Thecc1EG022372 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4164344-4174343 Theobroma cacao
Thecc1EG022372 10.0kb downstream 10.0kb downstream 15815 true scaffold_5: 4174344-4190158 Theobroma cacao
Thecc1EG022372 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4180159-4190158 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
123831169 5264 Brassicales-Malvales View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain