Gene : Thecc1EG022359 T. cacao v1.1

Defline:  (1 of 1) PTHR31614:SF13 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  724
Name:  ? Thecc1EG022359 Secondary Identifier:  ? PAC:27422791

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022359 0.5kb upstream 0.5kb upstream 2145 true scaffold_5: 4111201-4113345 Theobroma cacao
Thecc1EG022359 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4112846-4113345 Theobroma cacao
Thecc1EG022359 0.5kb downstream 0.5kb downstream 2145 true scaffold_5: 4110701-4112845 Theobroma cacao
Thecc1EG022359 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4110701-4111200 Theobroma cacao
Thecc1EG022359 1.0kb upstream 1.0kb upstream 2645 true scaffold_5: 4111201-4113845 Theobroma cacao
Thecc1EG022359 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4112846-4113845 Theobroma cacao
Thecc1EG022359 1.0kb downstream 1.0kb downstream 2645 true scaffold_5: 4110201-4112845 Theobroma cacao
Thecc1EG022359 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4110201-4111200 Theobroma cacao
Thecc1EG022359 2.0kb upstream 2.0kb upstream 3645 true scaffold_5: 4111201-4114845 Theobroma cacao
Thecc1EG022359 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4112846-4114845 Theobroma cacao
Thecc1EG022359 2.0kb downstream 2.0kb downstream 3645 true scaffold_5: 4109201-4112845 Theobroma cacao
Thecc1EG022359 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4109201-4111200 Theobroma cacao
Thecc1EG022359 5.0kb upstream 5.0kb upstream 6645 true scaffold_5: 4111201-4117845 Theobroma cacao
Thecc1EG022359 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4112846-4117845 Theobroma cacao
Thecc1EG022359 5.0kb downstream 5.0kb downstream 6645 true scaffold_5: 4106201-4112845 Theobroma cacao
Thecc1EG022359 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4106201-4111200 Theobroma cacao
Thecc1EG022359 10.0kb upstream 10.0kb upstream 11645 true scaffold_5: 4111201-4122845 Theobroma cacao
Thecc1EG022359 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4112846-4122845 Theobroma cacao
Thecc1EG022359 10.0kb downstream 10.0kb downstream 11645 true scaffold_5: 4101201-4112845 Theobroma cacao
Thecc1EG022359 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4101201-4111200 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834633 5264 Brassicales-Malvales View MSA
124346039 5266 SBM View MSA
124238261 5268 Malvidae View MSA
124072733 5270 Rosid View MSA
123745578 5271 Pentapetalae View MSA
122796386 5272 Eudicot View MSA
122047345 5273 Angiosperm View MSA
121310733 5274 Embryophyte View MSA
123348146 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain