Gene : Pavir.6KG272200 P. virgatum v4.1
Defline:  (1 of 2) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  2444
Name:  ? Pavir.6KG272200 Secondary Identifier:  ? PAC:37691420
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum GLUCONEO-PWY Panicum virgatum pathologic  
Pvirgatum GLYOXYLATE-BYPASS Panicum virgatum pathologic  
Pvirgatum PWY-5464 Panicum virgatum pathologic  
Pvirgatum PWY-561 Panicum virgatum pathologic  
Pvirgatum PWY-5690 Panicum virgatum pathologic  
Pvirgatum PWY-7115 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG272200 0.5kb upstream 0.5kb upstream 3135 true Chr06K: 56117552-56120686 Panicum virgatum
Pavir.6KG272200 0.5kb upstream 0.5kb upstream 500 false Chr06K: 56117552-56118051 Panicum virgatum
Pavir.6KG272200 0.5kb downstream 0.5kb downstream 3135 true Chr06K: 56118052-56121186 Panicum virgatum
Pavir.6KG272200 0.5kb downstream 0.5kb downstream 500 false Chr06K: 56120687-56121186 Panicum virgatum
Pavir.6KG272200 1.0kb upstream 1.0kb upstream 3635 true Chr06K: 56117052-56120686 Panicum virgatum
Pavir.6KG272200 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 56117052-56118051 Panicum virgatum
Pavir.6KG272200 1.0kb downstream 1.0kb downstream 3635 true Chr06K: 56118052-56121686 Panicum virgatum
Pavir.6KG272200 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 56120687-56121686 Panicum virgatum
Pavir.6KG272200 2.0kb upstream 2.0kb upstream 4635 true Chr06K: 56116052-56120686 Panicum virgatum
Pavir.6KG272200 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 56116052-56118051 Panicum virgatum
Pavir.6KG272200 2.0kb downstream 2.0kb downstream 4635 true Chr06K: 56118052-56122686 Panicum virgatum
Pavir.6KG272200 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 56120687-56122686 Panicum virgatum
Pavir.6KG272200 5.0kb upstream 5.0kb upstream 7635 true Chr06K: 56113052-56120686 Panicum virgatum
Pavir.6KG272200 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 56113052-56118051 Panicum virgatum
Pavir.6KG272200 5.0kb downstream 5.0kb downstream 7635 true Chr06K: 56118052-56125686 Panicum virgatum
Pavir.6KG272200 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 56120687-56125686 Panicum virgatum
Pavir.6KG272200 10.0kb upstream 10.0kb upstream 12635 true Chr06K: 56108052-56120686 Panicum virgatum
Pavir.6KG272200 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 56108052-56118051 Panicum virgatum
Pavir.6KG272200 10.0kb downstream 10.0kb downstream 12635 true Chr06K: 56118052-56130686 Panicum virgatum
Pavir.6KG272200 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 56120687-56130686 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182824 5267 Panicoideae View MSA
124581748 5269 Grass View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain