Gene : Thecc1EG022872 T. cacao v1.1
Defline:  (1 of 1) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  999
Name:  ? Thecc1EG022872 Secondary Identifier:  ? PAC:27423247
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022872 0.5kb upstream 0.5kb upstream 4825 true scaffold_5: 8368866-8373690 Theobroma cacao
Thecc1EG022872 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8368866-8369365 Theobroma cacao
Thecc1EG022872 0.5kb downstream 0.5kb downstream 4825 true scaffold_5: 8369366-8374190 Theobroma cacao
Thecc1EG022872 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8373691-8374190 Theobroma cacao
Thecc1EG022872 1.0kb upstream 1.0kb upstream 5325 true scaffold_5: 8368366-8373690 Theobroma cacao
Thecc1EG022872 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8368366-8369365 Theobroma cacao
Thecc1EG022872 1.0kb downstream 1.0kb downstream 5325 true scaffold_5: 8369366-8374690 Theobroma cacao
Thecc1EG022872 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8373691-8374690 Theobroma cacao
Thecc1EG022872 2.0kb upstream 2.0kb upstream 6325 true scaffold_5: 8367366-8373690 Theobroma cacao
Thecc1EG022872 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8367366-8369365 Theobroma cacao
Thecc1EG022872 2.0kb downstream 2.0kb downstream 6325 true scaffold_5: 8369366-8375690 Theobroma cacao
Thecc1EG022872 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8373691-8375690 Theobroma cacao
Thecc1EG022872 5.0kb upstream 5.0kb upstream 9325 true scaffold_5: 8364366-8373690 Theobroma cacao
Thecc1EG022872 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8364366-8369365 Theobroma cacao
Thecc1EG022872 5.0kb downstream 5.0kb downstream 9325 true scaffold_5: 8369366-8378690 Theobroma cacao
Thecc1EG022872 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8373691-8378690 Theobroma cacao
Thecc1EG022872 10.0kb upstream 10.0kb upstream 14325 true scaffold_5: 8359366-8373690 Theobroma cacao
Thecc1EG022872 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8359366-8369365 Theobroma cacao
Thecc1EG022872 10.0kb downstream 10.0kb downstream 14325 true scaffold_5: 8369366-8383690 Theobroma cacao
Thecc1EG022872 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8373691-8383690 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833946 5264 Brassicales-Malvales View MSA
124337005 5266 SBM View MSA
124244342 5268 Malvidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain