Gene : Pavir.9KG517900 P. virgatum v4.1
Defline:  (1 of 3) K01736 - chorismate synthase (aroC) Genomic Order:  4740
Name:  ? Pavir.9KG517900 Secondary Identifier:  ? PAC:37677454
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9KG517900 0.5kb upstream 0.5kb upstream 4716 true Chr09K: 76198284-76202999 Panicum virgatum
Pavir.9KG517900 0.5kb upstream 0.5kb upstream 500 false Chr09K: 76198284-76198783 Panicum virgatum
Pavir.9KG517900 0.5kb downstream 0.5kb downstream 4716 true Chr09K: 76198784-76203499 Panicum virgatum
Pavir.9KG517900 0.5kb downstream 0.5kb downstream 500 false Chr09K: 76203000-76203499 Panicum virgatum
Pavir.9KG517900 1.0kb upstream 1.0kb upstream 5216 true Chr09K: 76197784-76202999 Panicum virgatum
Pavir.9KG517900 1.0kb upstream 1.0kb upstream 1000 false Chr09K: 76197784-76198783 Panicum virgatum
Pavir.9KG517900 1.0kb downstream 1.0kb downstream 5216 true Chr09K: 76198784-76203999 Panicum virgatum
Pavir.9KG517900 1.0kb downstream 1.0kb downstream 1000 false Chr09K: 76203000-76203999 Panicum virgatum
Pavir.9KG517900 2.0kb upstream 2.0kb upstream 6216 true Chr09K: 76196784-76202999 Panicum virgatum
Pavir.9KG517900 2.0kb upstream 2.0kb upstream 2000 false Chr09K: 76196784-76198783 Panicum virgatum
Pavir.9KG517900 2.0kb downstream 2.0kb downstream 6216 true Chr09K: 76198784-76204999 Panicum virgatum
Pavir.9KG517900 2.0kb downstream 2.0kb downstream 2000 false Chr09K: 76203000-76204999 Panicum virgatum
Pavir.9KG517900 5.0kb upstream 5.0kb upstream 9216 true Chr09K: 76193784-76202999 Panicum virgatum
Pavir.9KG517900 5.0kb upstream 5.0kb upstream 5000 false Chr09K: 76193784-76198783 Panicum virgatum
Pavir.9KG517900 5.0kb downstream 5.0kb downstream 9216 true Chr09K: 76198784-76207999 Panicum virgatum
Pavir.9KG517900 5.0kb downstream 5.0kb downstream 5000 false Chr09K: 76203000-76207999 Panicum virgatum
Pavir.9KG517900 10.0kb upstream 10.0kb upstream 14216 true Chr09K: 76188784-76202999 Panicum virgatum
Pavir.9KG517900 10.0kb upstream 10.0kb upstream 10000 false Chr09K: 76188784-76198783 Panicum virgatum
Pavir.9KG517900 10.0kb downstream 10.0kb downstream 14216 true Chr09K: 76198784-76212999 Panicum virgatum
Pavir.9KG517900 10.0kb downstream 10.0kb downstream 10000 false Chr09K: 76203000-76212999 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122196469 5267 Panicoideae View MSA
124574152 5269 Grass View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain