Gene : Thecc1EG022891 T. cacao v1.1
Defline:  (1 of 1) PTHR31415//PTHR31415:SF2 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  1007
Name:  ? Thecc1EG022891 Secondary Identifier:  ? PAC:27422552
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022891 0.5kb upstream 0.5kb upstream 3449 true scaffold_5: 8530956-8534404 Theobroma cacao
Thecc1EG022891 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8533905-8534404 Theobroma cacao
Thecc1EG022891 0.5kb downstream 0.5kb downstream 3449 true scaffold_5: 8530456-8533904 Theobroma cacao
Thecc1EG022891 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8530456-8530955 Theobroma cacao
Thecc1EG022891 1.0kb upstream 1.0kb upstream 3949 true scaffold_5: 8530956-8534904 Theobroma cacao
Thecc1EG022891 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8533905-8534904 Theobroma cacao
Thecc1EG022891 1.0kb downstream 1.0kb downstream 3949 true scaffold_5: 8529956-8533904 Theobroma cacao
Thecc1EG022891 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8529956-8530955 Theobroma cacao
Thecc1EG022891 2.0kb upstream 2.0kb upstream 4949 true scaffold_5: 8530956-8535904 Theobroma cacao
Thecc1EG022891 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8533905-8535904 Theobroma cacao
Thecc1EG022891 2.0kb downstream 2.0kb downstream 4949 true scaffold_5: 8528956-8533904 Theobroma cacao
Thecc1EG022891 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8528956-8530955 Theobroma cacao
Thecc1EG022891 5.0kb upstream 5.0kb upstream 7949 true scaffold_5: 8530956-8538904 Theobroma cacao
Thecc1EG022891 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8533905-8538904 Theobroma cacao
Thecc1EG022891 5.0kb downstream 5.0kb downstream 7949 true scaffold_5: 8525956-8533904 Theobroma cacao
Thecc1EG022891 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8525956-8530955 Theobroma cacao
Thecc1EG022891 10.0kb upstream 10.0kb upstream 12949 true scaffold_5: 8530956-8543904 Theobroma cacao
Thecc1EG022891 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8533905-8543904 Theobroma cacao
Thecc1EG022891 10.0kb downstream 10.0kb downstream 12949 true scaffold_5: 8520956-8533904 Theobroma cacao
Thecc1EG022891 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8520956-8530955 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840054 5264 Brassicales-Malvales View MSA
124338455 5266 SBM View MSA
124238163 5268 Malvidae View MSA
124060633 5270 Rosid View MSA
123748303 5271 Pentapetalae View MSA
122796873 5272 Eudicot View MSA
122050146 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain