Gene : Thecc1EG022825 T. cacao v1.1
Defline:  (1 of 6) 1.1.1.331 - Secoisolariciresinol dehydrogenase Genomic Order:  976
Name:  ? Thecc1EG022825 Secondary Identifier:  ? PAC:27420865
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022825 0.5kb upstream 0.5kb upstream 1733 true scaffold_5: 7879865-7881597 Theobroma cacao
Thecc1EG022825 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7879865-7880364 Theobroma cacao
Thecc1EG022825 0.5kb downstream 0.5kb downstream 1733 true scaffold_5: 7880365-7882097 Theobroma cacao
Thecc1EG022825 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7881598-7882097 Theobroma cacao
Thecc1EG022825 1.0kb upstream 1.0kb upstream 2233 true scaffold_5: 7879365-7881597 Theobroma cacao
Thecc1EG022825 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7879365-7880364 Theobroma cacao
Thecc1EG022825 1.0kb downstream 1.0kb downstream 2233 true scaffold_5: 7880365-7882597 Theobroma cacao
Thecc1EG022825 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7881598-7882597 Theobroma cacao
Thecc1EG022825 2.0kb upstream 2.0kb upstream 3233 true scaffold_5: 7878365-7881597 Theobroma cacao
Thecc1EG022825 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7878365-7880364 Theobroma cacao
Thecc1EG022825 2.0kb downstream 2.0kb downstream 3233 true scaffold_5: 7880365-7883597 Theobroma cacao
Thecc1EG022825 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7881598-7883597 Theobroma cacao
Thecc1EG022825 5.0kb upstream 5.0kb upstream 6233 true scaffold_5: 7875365-7881597 Theobroma cacao
Thecc1EG022825 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7875365-7880364 Theobroma cacao
Thecc1EG022825 5.0kb downstream 5.0kb downstream 6233 true scaffold_5: 7880365-7886597 Theobroma cacao
Thecc1EG022825 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7881598-7886597 Theobroma cacao
Thecc1EG022825 10.0kb upstream 10.0kb upstream 11233 true scaffold_5: 7870365-7881597 Theobroma cacao
Thecc1EG022825 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7870365-7880364 Theobroma cacao
Thecc1EG022825 10.0kb downstream 10.0kb downstream 11233 true scaffold_5: 7880365-7891597 Theobroma cacao
Thecc1EG022825 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7881598-7891597 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824142 5264 Brassicales-Malvales View MSA
124320079 5266 SBM View MSA
124254344 5268 Malvidae View MSA
124071741 5270 Rosid View MSA
123749022 5271 Pentapetalae View MSA
122797133 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain