Gene : Pavir.9KG580100 P. virgatum v4.1
Defline:  (1 of 4) K01681 - aconitate hydratase (ACO, acnA) Genomic Order:  5673
Name:  ? Pavir.9KG580100 Secondary Identifier:  ? PAC:37672652
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum GLYOXYLATE-BYPASS Panicum virgatum pathologic  
Pvirgatum PWY-5464 Panicum virgatum pathologic  
Pvirgatum PWY-561 Panicum virgatum pathologic  
Pvirgatum PWY-5690 Panicum virgatum pathologic  
Pvirgatum PWY-6549 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9KG580100 0.5kb upstream 0.5kb upstream 7723 true Chr09K: 85212924-85220646 Panicum virgatum
Pavir.9KG580100 0.5kb upstream 0.5kb upstream 500 false Chr09K: 85212924-85213423 Panicum virgatum
Pavir.9KG580100 0.5kb downstream 0.5kb downstream 7723 true Chr09K: 85213424-85221146 Panicum virgatum
Pavir.9KG580100 0.5kb downstream 0.5kb downstream 500 false Chr09K: 85220647-85221146 Panicum virgatum
Pavir.9KG580100 1.0kb upstream 1.0kb upstream 8223 true Chr09K: 85212424-85220646 Panicum virgatum
Pavir.9KG580100 1.0kb upstream 1.0kb upstream 1000 false Chr09K: 85212424-85213423 Panicum virgatum
Pavir.9KG580100 1.0kb downstream 1.0kb downstream 8223 true Chr09K: 85213424-85221646 Panicum virgatum
Pavir.9KG580100 1.0kb downstream 1.0kb downstream 1000 false Chr09K: 85220647-85221646 Panicum virgatum
Pavir.9KG580100 2.0kb upstream 2.0kb upstream 9223 true Chr09K: 85211424-85220646 Panicum virgatum
Pavir.9KG580100 2.0kb upstream 2.0kb upstream 2000 false Chr09K: 85211424-85213423 Panicum virgatum
Pavir.9KG580100 2.0kb downstream 2.0kb downstream 9223 true Chr09K: 85213424-85222646 Panicum virgatum
Pavir.9KG580100 2.0kb downstream 2.0kb downstream 2000 false Chr09K: 85220647-85222646 Panicum virgatum
Pavir.9KG580100 5.0kb upstream 5.0kb upstream 12223 true Chr09K: 85208424-85220646 Panicum virgatum
Pavir.9KG580100 5.0kb upstream 5.0kb upstream 5000 false Chr09K: 85208424-85213423 Panicum virgatum
Pavir.9KG580100 5.0kb downstream 5.0kb downstream 12223 true Chr09K: 85213424-85225646 Panicum virgatum
Pavir.9KG580100 5.0kb downstream 5.0kb downstream 5000 false Chr09K: 85220647-85225646 Panicum virgatum
Pavir.9KG580100 10.0kb upstream 10.0kb upstream 17223 true Chr09K: 85203424-85220646 Panicum virgatum
Pavir.9KG580100 10.0kb upstream 10.0kb upstream 10000 false Chr09K: 85203424-85213423 Panicum virgatum
Pavir.9KG580100 10.0kb downstream 10.0kb downstream 17223 true Chr09K: 85213424-85230646 Panicum virgatum
Pavir.9KG580100 10.0kb downstream 10.0kb downstream 10000 false Chr09K: 85220647-85230646 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122025860 5273 Angiosperm View MSA
122177032 5267 Panicoideae View MSA
124588210 5269 Grass View MSA
121295930 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain