Gene : Thecc1EG022767 T. cacao v1.1

Defline:  (1 of 6) 1.1.1.331 - Secoisolariciresinol dehydrogenase Genomic Order:  956
Name:  ? Thecc1EG022767 Secondary Identifier:  ? PAC:27422762

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022767 0.5kb upstream 0.5kb upstream 4499 true scaffold_5: 7392336-7396834 Theobroma cacao
Thecc1EG022767 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7396335-7396834 Theobroma cacao
Thecc1EG022767 0.5kb downstream 0.5kb downstream 4499 true scaffold_5: 7391836-7396334 Theobroma cacao
Thecc1EG022767 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7391836-7392335 Theobroma cacao
Thecc1EG022767 1.0kb upstream 1.0kb upstream 4999 true scaffold_5: 7392336-7397334 Theobroma cacao
Thecc1EG022767 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7396335-7397334 Theobroma cacao
Thecc1EG022767 1.0kb downstream 1.0kb downstream 4999 true scaffold_5: 7391336-7396334 Theobroma cacao
Thecc1EG022767 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7391336-7392335 Theobroma cacao
Thecc1EG022767 2.0kb upstream 2.0kb upstream 5999 true scaffold_5: 7392336-7398334 Theobroma cacao
Thecc1EG022767 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7396335-7398334 Theobroma cacao
Thecc1EG022767 2.0kb downstream 2.0kb downstream 5999 true scaffold_5: 7390336-7396334 Theobroma cacao
Thecc1EG022767 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7390336-7392335 Theobroma cacao
Thecc1EG022767 5.0kb upstream 5.0kb upstream 8999 true scaffold_5: 7392336-7401334 Theobroma cacao
Thecc1EG022767 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7396335-7401334 Theobroma cacao
Thecc1EG022767 5.0kb downstream 5.0kb downstream 8999 true scaffold_5: 7387336-7396334 Theobroma cacao
Thecc1EG022767 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7387336-7392335 Theobroma cacao
Thecc1EG022767 10.0kb upstream 10.0kb upstream 13999 true scaffold_5: 7392336-7406334 Theobroma cacao
Thecc1EG022767 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7396335-7406334 Theobroma cacao
Thecc1EG022767 10.0kb downstream 10.0kb downstream 13999 true scaffold_5: 7382336-7396334 Theobroma cacao
Thecc1EG022767 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7382336-7392335 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827073 5264 Brassicales-Malvales View MSA
124348386 5266 SBM View MSA
124246229 5268 Malvidae View MSA
124070564 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain