Gene : Thecc1EG022732 T. cacao v1.1

Defline:  (1 of 1) PTHR11010//PTHR11010:SF48 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  942
Name:  ? Thecc1EG022732 Secondary Identifier:  ? PAC:27424427

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022732 0.5kb upstream 0.5kb upstream 9896 true scaffold_5: 7013474-7023369 Theobroma cacao
Thecc1EG022732 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7022870-7023369 Theobroma cacao
Thecc1EG022732 0.5kb downstream 0.5kb downstream 9896 true scaffold_5: 7012974-7022869 Theobroma cacao
Thecc1EG022732 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7012974-7013473 Theobroma cacao
Thecc1EG022732 1.0kb upstream 1.0kb upstream 10396 true scaffold_5: 7013474-7023869 Theobroma cacao
Thecc1EG022732 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7022870-7023869 Theobroma cacao
Thecc1EG022732 1.0kb downstream 1.0kb downstream 10396 true scaffold_5: 7012474-7022869 Theobroma cacao
Thecc1EG022732 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7012474-7013473 Theobroma cacao
Thecc1EG022732 2.0kb upstream 2.0kb upstream 11396 true scaffold_5: 7013474-7024869 Theobroma cacao
Thecc1EG022732 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7022870-7024869 Theobroma cacao
Thecc1EG022732 2.0kb downstream 2.0kb downstream 11396 true scaffold_5: 7011474-7022869 Theobroma cacao
Thecc1EG022732 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7011474-7013473 Theobroma cacao
Thecc1EG022732 5.0kb upstream 5.0kb upstream 14396 true scaffold_5: 7013474-7027869 Theobroma cacao
Thecc1EG022732 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7022870-7027869 Theobroma cacao
Thecc1EG022732 5.0kb downstream 5.0kb downstream 14396 true scaffold_5: 7008474-7022869 Theobroma cacao
Thecc1EG022732 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7008474-7013473 Theobroma cacao
Thecc1EG022732 10.0kb upstream 10.0kb upstream 19396 true scaffold_5: 7013474-7032869 Theobroma cacao
Thecc1EG022732 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7022870-7032869 Theobroma cacao
Thecc1EG022732 10.0kb downstream 10.0kb downstream 19396 true scaffold_5: 7003474-7022869 Theobroma cacao
Thecc1EG022732 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7003474-7013473 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825492 5264 Brassicales-Malvales View MSA
124349796 5266 SBM View MSA
124247393 5268 Malvidae View MSA
124070997 5270 Rosid View MSA
123753394 5271 Pentapetalae View MSA
122793921 5272 Eudicot View MSA
122049838 5273 Angiosperm View MSA
121344690 5274 Embryophyte View MSA
123428837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain