Gene : Thecc1EG022748 T. cacao v1.1
Defline:  (1 of 6) 1.1.1.331 - Secoisolariciresinol dehydrogenase Genomic Order:  950
Name:  ? Thecc1EG022748 Secondary Identifier:  ? PAC:27422542
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022748 0.5kb upstream 0.5kb upstream 1979 true scaffold_5: 7121084-7123062 Theobroma cacao
Thecc1EG022748 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7121084-7121583 Theobroma cacao
Thecc1EG022748 0.5kb downstream 0.5kb downstream 1979 true scaffold_5: 7121584-7123562 Theobroma cacao
Thecc1EG022748 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7123063-7123562 Theobroma cacao
Thecc1EG022748 1.0kb upstream 1.0kb upstream 2479 true scaffold_5: 7120584-7123062 Theobroma cacao
Thecc1EG022748 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7120584-7121583 Theobroma cacao
Thecc1EG022748 1.0kb downstream 1.0kb downstream 2479 true scaffold_5: 7121584-7124062 Theobroma cacao
Thecc1EG022748 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7123063-7124062 Theobroma cacao
Thecc1EG022748 2.0kb upstream 2.0kb upstream 3479 true scaffold_5: 7119584-7123062 Theobroma cacao
Thecc1EG022748 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7119584-7121583 Theobroma cacao
Thecc1EG022748 2.0kb downstream 2.0kb downstream 3479 true scaffold_5: 7121584-7125062 Theobroma cacao
Thecc1EG022748 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7123063-7125062 Theobroma cacao
Thecc1EG022748 5.0kb upstream 5.0kb upstream 6479 true scaffold_5: 7116584-7123062 Theobroma cacao
Thecc1EG022748 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7116584-7121583 Theobroma cacao
Thecc1EG022748 5.0kb downstream 5.0kb downstream 6479 true scaffold_5: 7121584-7128062 Theobroma cacao
Thecc1EG022748 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7123063-7128062 Theobroma cacao
Thecc1EG022748 10.0kb upstream 10.0kb upstream 11479 true scaffold_5: 7111584-7123062 Theobroma cacao
Thecc1EG022748 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7111584-7121583 Theobroma cacao
Thecc1EG022748 10.0kb downstream 10.0kb downstream 11479 true scaffold_5: 7121584-7133062 Theobroma cacao
Thecc1EG022748 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7123063-7133062 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824669 5264 Brassicales-Malvales View MSA
124348813 5266 SBM View MSA
124247331 5268 Malvidae View MSA
124072445 5270 Rosid View MSA
123749022 5271 Pentapetalae View MSA
122797133 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain