Gene : Thecc1EG022742 T. cacao v1.1

Defline:  (1 of 2) PTHR11014:SF108 - IAA-AMINO ACID HYDROLASE ILR1 Genomic Order:  948
Name:  ? Thecc1EG022742 Secondary Identifier:  ? PAC:27423654

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022742 0.5kb upstream 0.5kb upstream 3353 true scaffold_5: 7062263-7065615 Theobroma cacao
Thecc1EG022742 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7062263-7062762 Theobroma cacao
Thecc1EG022742 0.5kb downstream 0.5kb downstream 3353 true scaffold_5: 7062763-7066115 Theobroma cacao
Thecc1EG022742 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7065616-7066115 Theobroma cacao
Thecc1EG022742 1.0kb upstream 1.0kb upstream 3853 true scaffold_5: 7061763-7065615 Theobroma cacao
Thecc1EG022742 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7061763-7062762 Theobroma cacao
Thecc1EG022742 1.0kb downstream 1.0kb downstream 3853 true scaffold_5: 7062763-7066615 Theobroma cacao
Thecc1EG022742 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7065616-7066615 Theobroma cacao
Thecc1EG022742 2.0kb upstream 2.0kb upstream 4853 true scaffold_5: 7060763-7065615 Theobroma cacao
Thecc1EG022742 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7060763-7062762 Theobroma cacao
Thecc1EG022742 2.0kb downstream 2.0kb downstream 4853 true scaffold_5: 7062763-7067615 Theobroma cacao
Thecc1EG022742 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7065616-7067615 Theobroma cacao
Thecc1EG022742 5.0kb upstream 5.0kb upstream 7853 true scaffold_5: 7057763-7065615 Theobroma cacao
Thecc1EG022742 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7057763-7062762 Theobroma cacao
Thecc1EG022742 5.0kb downstream 5.0kb downstream 7853 true scaffold_5: 7062763-7070615 Theobroma cacao
Thecc1EG022742 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7065616-7070615 Theobroma cacao
Thecc1EG022742 10.0kb upstream 10.0kb upstream 12853 true scaffold_5: 7052763-7065615 Theobroma cacao
Thecc1EG022742 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7052763-7062762 Theobroma cacao
Thecc1EG022742 10.0kb downstream 10.0kb downstream 12853 true scaffold_5: 7062763-7075615 Theobroma cacao
Thecc1EG022742 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7065616-7075615 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836324 5264 Brassicales-Malvales View MSA
124348984 5266 SBM View MSA
124244461 5268 Malvidae View MSA
124072861 5270 Rosid View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain