Gene : Thecc1EG022727 T. cacao v1.1
Defline:  Embryo defective 2735 (67%T) Genomic Order:  939
Name:  ? Thecc1EG022727 Secondary Identifier:  ? PAC:27421190
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022727 0.5kb upstream 0.5kb upstream 3447 true scaffold_5: 6984842-6988288 Theobroma cacao
Thecc1EG022727 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6984842-6985341 Theobroma cacao
Thecc1EG022727 0.5kb downstream 0.5kb downstream 3447 true scaffold_5: 6985342-6988788 Theobroma cacao
Thecc1EG022727 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6988289-6988788 Theobroma cacao
Thecc1EG022727 1.0kb upstream 1.0kb upstream 3947 true scaffold_5: 6984342-6988288 Theobroma cacao
Thecc1EG022727 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6984342-6985341 Theobroma cacao
Thecc1EG022727 1.0kb downstream 1.0kb downstream 3947 true scaffold_5: 6985342-6989288 Theobroma cacao
Thecc1EG022727 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6988289-6989288 Theobroma cacao
Thecc1EG022727 2.0kb upstream 2.0kb upstream 4947 true scaffold_5: 6983342-6988288 Theobroma cacao
Thecc1EG022727 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6983342-6985341 Theobroma cacao
Thecc1EG022727 2.0kb downstream 2.0kb downstream 4947 true scaffold_5: 6985342-6990288 Theobroma cacao
Thecc1EG022727 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6988289-6990288 Theobroma cacao
Thecc1EG022727 5.0kb upstream 5.0kb upstream 7947 true scaffold_5: 6980342-6988288 Theobroma cacao
Thecc1EG022727 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6980342-6985341 Theobroma cacao
Thecc1EG022727 5.0kb downstream 5.0kb downstream 7947 true scaffold_5: 6985342-6993288 Theobroma cacao
Thecc1EG022727 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6988289-6993288 Theobroma cacao
Thecc1EG022727 10.0kb upstream 10.0kb upstream 12947 true scaffold_5: 6975342-6988288 Theobroma cacao
Thecc1EG022727 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6975342-6985341 Theobroma cacao
Thecc1EG022727 10.0kb downstream 10.0kb downstream 12947 true scaffold_5: 6985342-6998288 Theobroma cacao
Thecc1EG022727 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6988289-6998288 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828642 5264 Brassicales-Malvales View MSA
124345103 5266 SBM View MSA
124239910 5268 Malvidae View MSA
124065432 5270 Rosid View MSA
123747574 5271 Pentapetalae View MSA
122789622 5272 Eudicot View MSA
122046156 5273 Angiosperm View MSA
121344204 5274 Embryophyte View MSA
123425750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain