Gene : Pavir.J045800 P. virgatum v4.1
Defline:  (1 of 2) PTHR12608//PTHR12608:SF5 - TRANSMEMBRANE PROTEIN HTP-1 RELATED // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? Pavir.J045800 Secondary Identifier:  ? PAC:37563231
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J045800 0.5kb upstream 0.5kb upstream 4350 true scaffold_1141: 6384-10733 Panicum virgatum
Pavir.J045800 0.5kb upstream 0.5kb upstream 500 false scaffold_1141: 6384-6883 Panicum virgatum
Pavir.J045800 0.5kb downstream 0.5kb downstream 4350 true scaffold_1141: 6884-11233 Panicum virgatum
Pavir.J045800 0.5kb downstream 0.5kb downstream 500 false scaffold_1141: 10734-11233 Panicum virgatum
Pavir.J045800 1.0kb upstream 1.0kb upstream 4850 true scaffold_1141: 5884-10733 Panicum virgatum
Pavir.J045800 1.0kb upstream 1.0kb upstream 1000 false scaffold_1141: 5884-6883 Panicum virgatum
Pavir.J045800 1.0kb downstream 1.0kb downstream 4850 true scaffold_1141: 6884-11733 Panicum virgatum
Pavir.J045800 1.0kb downstream 1.0kb downstream 1000 false scaffold_1141: 10734-11733 Panicum virgatum
Pavir.J045800 2.0kb upstream 2.0kb upstream 5850 true scaffold_1141: 4884-10733 Panicum virgatum
Pavir.J045800 2.0kb upstream 2.0kb upstream 2000 false scaffold_1141: 4884-6883 Panicum virgatum
Pavir.J045800 2.0kb downstream 2.0kb downstream 5850 true scaffold_1141: 6884-12733 Panicum virgatum
Pavir.J045800 2.0kb downstream 2.0kb downstream 2000 false scaffold_1141: 10734-12733 Panicum virgatum
Pavir.J045800 5.0kb upstream 5.0kb upstream 8850 true scaffold_1141: 1884-10733 Panicum virgatum
Pavir.J045800 5.0kb upstream 5.0kb upstream 5000 false scaffold_1141: 1884-6883 Panicum virgatum
Pavir.J045800 5.0kb downstream 5.0kb downstream 8850 true scaffold_1141: 6884-15733 Panicum virgatum
Pavir.J045800 5.0kb downstream 5.0kb downstream 5000 false scaffold_1141: 10734-15733 Panicum virgatum
Pavir.J045800 10.0kb upstream 10.0kb upstream 10733 true scaffold_1141: 1-10733 Panicum virgatum
Pavir.J045800 10.0kb upstream 10.0kb upstream 6883 false scaffold_1141: 1-6883 Panicum virgatum
Pavir.J045800 10.0kb downstream 10.0kb downstream 13850 true scaffold_1141: 6884-20733 Panicum virgatum
Pavir.J045800 10.0kb downstream 10.0kb downstream 10000 false scaffold_1141: 10734-20733 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186640 5267 Panicoideae View MSA
124585153 5269 Grass View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain