Gene : Thecc1EG022664 T. cacao v1.1

Defline:  (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) Genomic Order:  911
Name:  ? Thecc1EG022664 Secondary Identifier:  ? PAC:27424852

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022664 0.5kb upstream 0.5kb upstream 4669 true scaffold_5: 6357980-6362648 Theobroma cacao
Thecc1EG022664 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6362149-6362648 Theobroma cacao
Thecc1EG022664 0.5kb downstream 0.5kb downstream 4669 true scaffold_5: 6357480-6362148 Theobroma cacao
Thecc1EG022664 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6357480-6357979 Theobroma cacao
Thecc1EG022664 1.0kb upstream 1.0kb upstream 5169 true scaffold_5: 6357980-6363148 Theobroma cacao
Thecc1EG022664 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6362149-6363148 Theobroma cacao
Thecc1EG022664 1.0kb downstream 1.0kb downstream 5169 true scaffold_5: 6356980-6362148 Theobroma cacao
Thecc1EG022664 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6356980-6357979 Theobroma cacao
Thecc1EG022664 2.0kb upstream 2.0kb upstream 6169 true scaffold_5: 6357980-6364148 Theobroma cacao
Thecc1EG022664 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6362149-6364148 Theobroma cacao
Thecc1EG022664 2.0kb downstream 2.0kb downstream 6169 true scaffold_5: 6355980-6362148 Theobroma cacao
Thecc1EG022664 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6355980-6357979 Theobroma cacao
Thecc1EG022664 5.0kb upstream 5.0kb upstream 9169 true scaffold_5: 6357980-6367148 Theobroma cacao
Thecc1EG022664 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6362149-6367148 Theobroma cacao
Thecc1EG022664 5.0kb downstream 5.0kb downstream 9169 true scaffold_5: 6352980-6362148 Theobroma cacao
Thecc1EG022664 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6352980-6357979 Theobroma cacao
Thecc1EG022664 10.0kb upstream 10.0kb upstream 14169 true scaffold_5: 6357980-6372148 Theobroma cacao
Thecc1EG022664 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6362149-6372148 Theobroma cacao
Thecc1EG022664 10.0kb downstream 10.0kb downstream 14169 true scaffold_5: 6347980-6362148 Theobroma cacao
Thecc1EG022664 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6347980-6357979 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829702 5264 Brassicales-Malvales View MSA
124339963 5266 SBM View MSA
124238057 5268 Malvidae View MSA
124066249 5270 Rosid View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain