Gene : Pavir.5NG037500 P. virgatum v4.1
Defline:  (1 of 2) PTHR11851//PTHR11851:SF138 - METALLOPROTEASE // SUBFAMILY NOT NAMED Genomic Order:  457
Name:  ? Pavir.5NG037500 Secondary Identifier:  ? PAC:37575216
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-3781 Panicum virgatum pathologic  
Pvirgatum PWY-7279 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG037500 0.5kb upstream 0.5kb upstream 6915 true Chr05N: 6517401-6524315 Panicum virgatum
Pavir.5NG037500 0.5kb upstream 0.5kb upstream 500 false Chr05N: 6523816-6524315 Panicum virgatum
Pavir.5NG037500 0.5kb downstream 0.5kb downstream 6915 true Chr05N: 6516901-6523815 Panicum virgatum
Pavir.5NG037500 0.5kb downstream 0.5kb downstream 500 false Chr05N: 6516901-6517400 Panicum virgatum
Pavir.5NG037500 1.0kb upstream 1.0kb upstream 7415 true Chr05N: 6517401-6524815 Panicum virgatum
Pavir.5NG037500 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 6523816-6524815 Panicum virgatum
Pavir.5NG037500 1.0kb downstream 1.0kb downstream 7415 true Chr05N: 6516401-6523815 Panicum virgatum
Pavir.5NG037500 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 6516401-6517400 Panicum virgatum
Pavir.5NG037500 2.0kb upstream 2.0kb upstream 8415 true Chr05N: 6517401-6525815 Panicum virgatum
Pavir.5NG037500 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 6523816-6525815 Panicum virgatum
Pavir.5NG037500 2.0kb downstream 2.0kb downstream 8415 true Chr05N: 6515401-6523815 Panicum virgatum
Pavir.5NG037500 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 6515401-6517400 Panicum virgatum
Pavir.5NG037500 5.0kb upstream 5.0kb upstream 11415 true Chr05N: 6517401-6528815 Panicum virgatum
Pavir.5NG037500 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 6523816-6528815 Panicum virgatum
Pavir.5NG037500 5.0kb downstream 5.0kb downstream 11415 true Chr05N: 6512401-6523815 Panicum virgatum
Pavir.5NG037500 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 6512401-6517400 Panicum virgatum
Pavir.5NG037500 10.0kb upstream 10.0kb upstream 16415 true Chr05N: 6517401-6533815 Panicum virgatum
Pavir.5NG037500 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 6523816-6533815 Panicum virgatum
Pavir.5NG037500 10.0kb downstream 10.0kb downstream 16415 true Chr05N: 6507401-6523815 Panicum virgatum
Pavir.5NG037500 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 6507401-6517400 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122189080 5267 Panicoideae View MSA
124574686 5269 Grass View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain