Gene : Thecc1EG022654 T. cacao v1.1
Defline:  (1 of 1) K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) Genomic Order:  904
Name:  ? Thecc1EG022654 Secondary Identifier:  ? PAC:27423927
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022654 0.5kb upstream 0.5kb upstream 26508 true scaffold_5: 6295896-6322403 Theobroma cacao
Thecc1EG022654 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6321904-6322403 Theobroma cacao
Thecc1EG022654 0.5kb downstream 0.5kb downstream 26508 true scaffold_5: 6295396-6321903 Theobroma cacao
Thecc1EG022654 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6295396-6295895 Theobroma cacao
Thecc1EG022654 1.0kb upstream 1.0kb upstream 27008 true scaffold_5: 6295896-6322903 Theobroma cacao
Thecc1EG022654 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6321904-6322903 Theobroma cacao
Thecc1EG022654 1.0kb downstream 1.0kb downstream 27008 true scaffold_5: 6294896-6321903 Theobroma cacao
Thecc1EG022654 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6294896-6295895 Theobroma cacao
Thecc1EG022654 2.0kb upstream 2.0kb upstream 28008 true scaffold_5: 6295896-6323903 Theobroma cacao
Thecc1EG022654 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6321904-6323903 Theobroma cacao
Thecc1EG022654 2.0kb downstream 2.0kb downstream 28008 true scaffold_5: 6293896-6321903 Theobroma cacao
Thecc1EG022654 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6293896-6295895 Theobroma cacao
Thecc1EG022654 5.0kb upstream 5.0kb upstream 31008 true scaffold_5: 6295896-6326903 Theobroma cacao
Thecc1EG022654 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6321904-6326903 Theobroma cacao
Thecc1EG022654 5.0kb downstream 5.0kb downstream 31008 true scaffold_5: 6290896-6321903 Theobroma cacao
Thecc1EG022654 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6290896-6295895 Theobroma cacao
Thecc1EG022654 10.0kb upstream 10.0kb upstream 36008 true scaffold_5: 6295896-6331903 Theobroma cacao
Thecc1EG022654 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6321904-6331903 Theobroma cacao
Thecc1EG022654 10.0kb downstream 10.0kb downstream 36008 true scaffold_5: 6285896-6321903 Theobroma cacao
Thecc1EG022654 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6285896-6295895 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841008 5264 Brassicales-Malvales View MSA
124341254 5266 SBM View MSA
124250872 5268 Malvidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain