Gene : Pavir.5NG005900 P. virgatum v4.1
Defline:  (1 of 119) 3.1.1.11 - Pectinesterase / Pectin methylesterase Genomic Order:  36
Name:  ? Pavir.5NG005900 Secondary Identifier:  ? PAC:37572760
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-1081 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG005900 0.5kb upstream 0.5kb upstream 2503 true Chr05N: 270204-272706 Panicum virgatum
Pavir.5NG005900 0.5kb upstream 0.5kb upstream 500 false Chr05N: 272207-272706 Panicum virgatum
Pavir.5NG005900 0.5kb downstream 0.5kb downstream 2503 true Chr05N: 269704-272206 Panicum virgatum
Pavir.5NG005900 0.5kb downstream 0.5kb downstream 500 false Chr05N: 269704-270203 Panicum virgatum
Pavir.5NG005900 1.0kb upstream 1.0kb upstream 3003 true Chr05N: 270204-273206 Panicum virgatum
Pavir.5NG005900 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 272207-273206 Panicum virgatum
Pavir.5NG005900 1.0kb downstream 1.0kb downstream 3003 true Chr05N: 269204-272206 Panicum virgatum
Pavir.5NG005900 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 269204-270203 Panicum virgatum
Pavir.5NG005900 2.0kb upstream 2.0kb upstream 4003 true Chr05N: 270204-274206 Panicum virgatum
Pavir.5NG005900 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 272207-274206 Panicum virgatum
Pavir.5NG005900 2.0kb downstream 2.0kb downstream 4003 true Chr05N: 268204-272206 Panicum virgatum
Pavir.5NG005900 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 268204-270203 Panicum virgatum
Pavir.5NG005900 5.0kb upstream 5.0kb upstream 7003 true Chr05N: 270204-277206 Panicum virgatum
Pavir.5NG005900 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 272207-277206 Panicum virgatum
Pavir.5NG005900 5.0kb downstream 5.0kb downstream 7003 true Chr05N: 265204-272206 Panicum virgatum
Pavir.5NG005900 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 265204-270203 Panicum virgatum
Pavir.5NG005900 10.0kb upstream 10.0kb upstream 12003 true Chr05N: 270204-282206 Panicum virgatum
Pavir.5NG005900 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 272207-282206 Panicum virgatum
Pavir.5NG005900 10.0kb downstream 10.0kb downstream 12003 true Chr05N: 260204-272206 Panicum virgatum
Pavir.5NG005900 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 260204-270203 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197125 5267 Panicoideae View MSA
124584679 5269 Grass View MSA
122043800 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain