Gene : Thecc1EG022620 T. cacao v1.1
Defline:  (1 of 1) PTHR12215:SF10 - L-AMINOADIPATE-SEMIALDEHYDE DEHYDROGENASE-PHOSPHOPANTETHEINYL TRANSFERASE Genomic Order:  880
Name:  ? Thecc1EG022620 Secondary Identifier:  ? PAC:27420672
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6012-1 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022620 0.5kb upstream 0.5kb upstream 3462 true scaffold_5: 6073271-6076732 Theobroma cacao
Thecc1EG022620 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6076233-6076732 Theobroma cacao
Thecc1EG022620 0.5kb downstream 0.5kb downstream 3462 true scaffold_5: 6072771-6076232 Theobroma cacao
Thecc1EG022620 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6072771-6073270 Theobroma cacao
Thecc1EG022620 1.0kb upstream 1.0kb upstream 3962 true scaffold_5: 6073271-6077232 Theobroma cacao
Thecc1EG022620 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6076233-6077232 Theobroma cacao
Thecc1EG022620 1.0kb downstream 1.0kb downstream 3962 true scaffold_5: 6072271-6076232 Theobroma cacao
Thecc1EG022620 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6072271-6073270 Theobroma cacao
Thecc1EG022620 2.0kb upstream 2.0kb upstream 4962 true scaffold_5: 6073271-6078232 Theobroma cacao
Thecc1EG022620 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6076233-6078232 Theobroma cacao
Thecc1EG022620 2.0kb downstream 2.0kb downstream 4962 true scaffold_5: 6071271-6076232 Theobroma cacao
Thecc1EG022620 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6071271-6073270 Theobroma cacao
Thecc1EG022620 5.0kb upstream 5.0kb upstream 7962 true scaffold_5: 6073271-6081232 Theobroma cacao
Thecc1EG022620 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6076233-6081232 Theobroma cacao
Thecc1EG022620 5.0kb downstream 5.0kb downstream 7962 true scaffold_5: 6068271-6076232 Theobroma cacao
Thecc1EG022620 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6068271-6073270 Theobroma cacao
Thecc1EG022620 10.0kb upstream 10.0kb upstream 12962 true scaffold_5: 6073271-6086232 Theobroma cacao
Thecc1EG022620 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6076233-6086232 Theobroma cacao
Thecc1EG022620 10.0kb downstream 10.0kb downstream 12962 true scaffold_5: 6063271-6076232 Theobroma cacao
Thecc1EG022620 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6063271-6073270 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828451 5264 Brassicales-Malvales View MSA
124345495 5266 SBM View MSA
124252308 5268 Malvidae View MSA
124062449 5270 Rosid View MSA
123736560 5271 Pentapetalae View MSA
122793006 5272 Eudicot View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain