Gene : Pavir.5NG132900 P. virgatum v4.1
Defline:  (1 of 2) PTHR11777:SF7 - THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEIN Genomic Order:  1208
Name:  ? Pavir.5NG132900 Secondary Identifier:  ? PAC:37578999
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG132900 0.5kb upstream 0.5kb upstream 3783 true Chr05N: 16204668-16208450 Panicum virgatum
Pavir.5NG132900 0.5kb upstream 0.5kb upstream 500 false Chr05N: 16204668-16205167 Panicum virgatum
Pavir.5NG132900 0.5kb downstream 0.5kb downstream 3783 true Chr05N: 16205168-16208950 Panicum virgatum
Pavir.5NG132900 0.5kb downstream 0.5kb downstream 500 false Chr05N: 16208451-16208950 Panicum virgatum
Pavir.5NG132900 1.0kb upstream 1.0kb upstream 4283 true Chr05N: 16204168-16208450 Panicum virgatum
Pavir.5NG132900 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 16204168-16205167 Panicum virgatum
Pavir.5NG132900 1.0kb downstream 1.0kb downstream 4283 true Chr05N: 16205168-16209450 Panicum virgatum
Pavir.5NG132900 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 16208451-16209450 Panicum virgatum
Pavir.5NG132900 2.0kb upstream 2.0kb upstream 5283 true Chr05N: 16203168-16208450 Panicum virgatum
Pavir.5NG132900 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 16203168-16205167 Panicum virgatum
Pavir.5NG132900 2.0kb downstream 2.0kb downstream 5283 true Chr05N: 16205168-16210450 Panicum virgatum
Pavir.5NG132900 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 16208451-16210450 Panicum virgatum
Pavir.5NG132900 5.0kb upstream 5.0kb upstream 8283 true Chr05N: 16200168-16208450 Panicum virgatum
Pavir.5NG132900 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 16200168-16205167 Panicum virgatum
Pavir.5NG132900 5.0kb downstream 5.0kb downstream 8283 true Chr05N: 16205168-16213450 Panicum virgatum
Pavir.5NG132900 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 16208451-16213450 Panicum virgatum
Pavir.5NG132900 10.0kb upstream 10.0kb upstream 13283 true Chr05N: 16195168-16208450 Panicum virgatum
Pavir.5NG132900 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 16195168-16205167 Panicum virgatum
Pavir.5NG132900 10.0kb downstream 10.0kb downstream 13283 true Chr05N: 16205168-16218450 Panicum virgatum
Pavir.5NG132900 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 16208451-16218450 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041267 5273 Angiosperm View MSA
122175505 5267 Panicoideae View MSA
124575580 5269 Grass View MSA
121346902 5274 Embryophyte View MSA
123425374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain