Gene : Thecc1EG022598 T. cacao v1.1
Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  864
Name:  ? Thecc1EG022598 Secondary Identifier:  ? PAC:27423065
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao HISTSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022598 0.5kb upstream 0.5kb upstream 4832 true scaffold_5: 5933963-5938794 Theobroma cacao
Thecc1EG022598 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5933963-5934462 Theobroma cacao
Thecc1EG022598 0.5kb downstream 0.5kb downstream 4832 true scaffold_5: 5934463-5939294 Theobroma cacao
Thecc1EG022598 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5938795-5939294 Theobroma cacao
Thecc1EG022598 1.0kb upstream 1.0kb upstream 5332 true scaffold_5: 5933463-5938794 Theobroma cacao
Thecc1EG022598 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5933463-5934462 Theobroma cacao
Thecc1EG022598 1.0kb downstream 1.0kb downstream 5332 true scaffold_5: 5934463-5939794 Theobroma cacao
Thecc1EG022598 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5938795-5939794 Theobroma cacao
Thecc1EG022598 2.0kb upstream 2.0kb upstream 6332 true scaffold_5: 5932463-5938794 Theobroma cacao
Thecc1EG022598 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5932463-5934462 Theobroma cacao
Thecc1EG022598 2.0kb downstream 2.0kb downstream 6332 true scaffold_5: 5934463-5940794 Theobroma cacao
Thecc1EG022598 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5938795-5940794 Theobroma cacao
Thecc1EG022598 5.0kb upstream 5.0kb upstream 9332 true scaffold_5: 5929463-5938794 Theobroma cacao
Thecc1EG022598 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5929463-5934462 Theobroma cacao
Thecc1EG022598 5.0kb downstream 5.0kb downstream 9332 true scaffold_5: 5934463-5943794 Theobroma cacao
Thecc1EG022598 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5938795-5943794 Theobroma cacao
Thecc1EG022598 10.0kb upstream 10.0kb upstream 14332 true scaffold_5: 5924463-5938794 Theobroma cacao
Thecc1EG022598 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5924463-5934462 Theobroma cacao
Thecc1EG022598 10.0kb downstream 10.0kb downstream 14332 true scaffold_5: 5934463-5948794 Theobroma cacao
Thecc1EG022598 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5938795-5948794 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
123820272 5264 Brassicales-Malvales Singleton cluster - no MSA
124316490 5266 SBM Singleton cluster - no MSA
124249241 5268 Malvidae View MSA
124061773 5270 Rosid View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain