Gene : Thecc1EG022604 T. cacao v1.1
Defline:  (1 of 7) K01674 - carbonic anhydrase (cah) Genomic Order:  868
Name:  ? Thecc1EG022604 Secondary Identifier:  ? PAC:27425150
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CYANCAT-PWY Theobroma cacao pathologic  
Tcacao PWY-241 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  
Tcacao PWYQT-4429 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022604 0.5kb upstream 0.5kb upstream 19560 true scaffold_5: 5980321-5999880 Theobroma cacao
Thecc1EG022604 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5980321-5980820 Theobroma cacao
Thecc1EG022604 0.5kb downstream 0.5kb downstream 19560 true scaffold_5: 5980821-6000380 Theobroma cacao
Thecc1EG022604 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5999881-6000380 Theobroma cacao
Thecc1EG022604 1.0kb upstream 1.0kb upstream 20060 true scaffold_5: 5979821-5999880 Theobroma cacao
Thecc1EG022604 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5979821-5980820 Theobroma cacao
Thecc1EG022604 1.0kb downstream 1.0kb downstream 20060 true scaffold_5: 5980821-6000880 Theobroma cacao
Thecc1EG022604 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5999881-6000880 Theobroma cacao
Thecc1EG022604 2.0kb upstream 2.0kb upstream 21060 true scaffold_5: 5978821-5999880 Theobroma cacao
Thecc1EG022604 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5978821-5980820 Theobroma cacao
Thecc1EG022604 2.0kb downstream 2.0kb downstream 21060 true scaffold_5: 5980821-6001880 Theobroma cacao
Thecc1EG022604 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5999881-6001880 Theobroma cacao
Thecc1EG022604 5.0kb upstream 5.0kb upstream 24060 true scaffold_5: 5975821-5999880 Theobroma cacao
Thecc1EG022604 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5975821-5980820 Theobroma cacao
Thecc1EG022604 5.0kb downstream 5.0kb downstream 24060 true scaffold_5: 5980821-6004880 Theobroma cacao
Thecc1EG022604 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5999881-6004880 Theobroma cacao
Thecc1EG022604 10.0kb upstream 10.0kb upstream 29060 true scaffold_5: 5970821-5999880 Theobroma cacao
Thecc1EG022604 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5970821-5980820 Theobroma cacao
Thecc1EG022604 10.0kb downstream 10.0kb downstream 29060 true scaffold_5: 5980821-6009880 Theobroma cacao
Thecc1EG022604 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5999881-6009880 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837030 5264 Brassicales-Malvales View MSA
124346986 5266 SBM View MSA
124246134 5268 Malvidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain